PDB entry 3mhs
View 3mhs on RCSB PDB site
Description: Structure of the SAGA Ubp8/Sgf11/Sus1/Sgf73 DUB module bound to ubiquitin aldehyde
Class: Hydrolase/transcription regulator/protein binding
Keywords: Multi-protein complex, Hydrolase-transcription regulator-protein binding complex, Acetylation, Cytoplasm, Isopeptide bond, Nucleus, Phosphoprotein, Ubl conjugation
Deposited on
2010-04-08, released
2010-04-21
The last revision prior to the SCOPe 2.07 freeze date was dated
2010-06-09, with a file datestamp of
2010-06-04.
Experiment type: XRAY
Resolution: 1.89 Å
R-factor: 0.161
AEROSPACI score: 0.51
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ubiquitin carboxyl-terminal hydrolase 8
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: UBP8, YMR223W, YM9959.05
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Protein SUS1
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: SUS1, YBR111W-A
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3mhsb_ - Chain 'C':
Compound: SAGA-associated factor 11
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: SGF11, YPL047W
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: Ubiquitin
Species: Homo sapiens [TaxId:9606]
Gene: RPS27A, UBA52, UBB, UBC
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3mhsd_ - Chain 'E':
Compound: SAGA-associated factor 73
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: SGF73, YGL066W
Database cross-references and differences (RAF-indexed):
- Heterogens: EDO, GOL, ZN, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3mhsB (B:)
mtmdtaqlksqiqqylvesgnyelisnelkarllqegwvdkvkdltksemninestnftq
ilstvepkalemvsdstretvlkqirefleeivdtq
Sequence, based on observed residues (ATOM records): (download)
>3mhsB (B:)
taqlksqiqqylvesgnyelisnelkarllqegwvdkvkdltksemninestnftqilst
vepkalemvsdstretvlkqirefleeivdt
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>3mhsD (D:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
- Chain 'E':
No sequence available.