PDB entry 3md2

View 3md2 on RCSB PDB site
Description: Crystal structure of the matrix protein 1 from influenza A virus (A/California/04/2009 (H1N1))
Class: viral protein
Keywords: swine flu, h1n1, influenza a virus, m1, viral protein
Deposited on 2010-03-29, released 2010-04-28
The last revision prior to the SCOPe 2.08 freeze date was dated 2010-04-28, with a file datestamp of 2010-04-23.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.214
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: matrix protein 1
    Species: Influenza A virus [TaxId:641501]
    Gene: M1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3md2a_
  • Chain 'B':
    Compound: matrix protein 1
    Species: Influenza A virus [TaxId:641501]
    Gene: M1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3md2b_
  • Chain 'C':
    Compound: matrix protein 1
    Species: Influenza A virus [TaxId:641501]
    Gene: M1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3md2c_
  • Chain 'D':
    Compound: matrix protein 1
    Species: Influenza A virus [TaxId:641501]
    Gene: M1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3md2d_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3md2A (A:)
slltevetyvlsiipsgplkaeiaqrlesvfagkntdlealmewlktrpilspltkgilg
fvftltvpserglqrrrfvqnalngngdpnnmdravklykklkreitfhgakevslsyst
galascmgliynrmgtvtteaafglvcatceqiadsq

    Sequence, based on observed residues (ATOM records): (download) 
    >3md2A (A:)
ltevetyvlsiipsgplkaeiaqrlesvfagkntdlealmewlktrpilspltkgilgfv
ftltrrfvqnalndpnnmdravklykklkreitfhgakevslsystgalascmgliynrm
gtvtteaafglvcatceqiads

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3md2B (B:)
slltevetyvlsiipsgplkaeiaqrlesvfagkntdlealmewlktrpilspltkgilg
fvftltvpserglqrrrfvqnalngngdpnnmdravklykklkreitfhgakevslsyst
galascmgliynrmgtvtteaafglvcatceqiadsq

    Sequence, based on observed residues (ATOM records): (download) 
    >3md2B (B:)
ltevetyvlsiipsgplkaeiaqrlesvfagkntdlealmewlktrpilspltkgilgfv
ftltrrfvqnalndpnnmdravklykklkreitfhgakevslsystgalascmgliynrm
gtvtteaafglvcatceqiads

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3md2C (C:)
slltevetyvlsiipsgplkaeiaqrlesvfagkntdlealmewlktrpilspltkgilg
fvftltvpserglqrrrfvqnalngngdpnnmdravklykklkreitfhgakevslsyst
galascmgliynrmgtvtteaafglvcatceqiadsq

    Sequence, based on observed residues (ATOM records): (download) 
    >3md2C (C:)
ltevetyvlsiipsgplkaeiaqrlesvfagkntdlealmewlktrpilspltkgilgfv
ftltrrfvqnalndpnnmdravklykklkreitfhgakevslsystgalascmgliynrm
gtvtteaafglvcatceqiads

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3md2D (D:)
slltevetyvlsiipsgplkaeiaqrlesvfagkntdlealmewlktrpilspltkgilg
fvftltvpserglqrrrfvqnalngngdpnnmdravklykklkreitfhgakevslsyst
galascmgliynrmgtvtteaafglvcatceqiadsq

    Sequence, based on observed residues (ATOM records): (download) 
    >3md2D (D:)
ltevetyvlsiipsgplkaeiaqrlesvfagkntdlealmewlktrpilspltkgilgfv
ftltrrfvqnalndpnnmdravklykklkreitfhgakevslsystgalascmgliynrm
gtvtteaafglvcatceqiads