PDB entry 3mbe

View 3mbe on RCSB PDB site
Description: TCR 21.30 in complex with MHC class II I-Ag7HEL(11-27)
Class: immune system
Keywords: T cell receptor, Histocompatability antigen, MHC class II, I-Ag7, IMMUNE SYSTEM
Deposited on 2010-03-25, released 2010-05-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.89 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: MHC CLASS II H2-IAg7 ALPHA CHAIN
  Species: Mus musculus [TaxId:10090]
  Gene: H2-Aa
  Database cross-references and differences (RAF-indexed):
  • Uniprot P04228 (Start-181)
    • expression tag (182-185)
• Chain 'B':
  Compound: MHC CLASS II H2-IAg7 BETA CHAIN
  Species: Mus musculus [TaxId:10090]
  Gene: H2-Ab1
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q31135 (Start-192)
    • expression tag (193)
• Chain 'C':
  Compound: TCR 21.3 alpha chain
  Species: Mus musculus [TaxId:10090]
  Gene: H2-Ab1
  Database cross-references and differences (RAF-indexed):
  • PDB 3MBE
• Chain 'D':
  Compound: TCR 21.3 beta chain
  Species: Mus musculus [TaxId:10090]
  Gene: H2-Ab1
  Database cross-references and differences (RAF-indexed):
  • PDB 3MBE
  Domains in SCOPe 2.08: d3mbed1, d3mbed2
• Chain 'E':
  Compound: MHC CLASS II H2-IAg7 ALPHA CHAIN
  Species: Mus musculus [TaxId:10090]
  Gene: H2-Aa
  Database cross-references and differences (RAF-indexed):
  • Uniprot P04228 (Start-181)
    • expression tag (182-185)
• Chain 'F':
  Compound: MHC CLASS II H2-IAg7 BETA CHAIN
  Species: Mus musculus [TaxId:10090]
  Gene: H2-Ab1
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q31135 (Start-192)
    • expression tag (193)
  Domains in SCOPe 2.08: d3mbef1, d3mbef2, d3mbef3
• Chain 'G':
  Compound: TCR 21.3 alpha chain
  Species: Mus musculus [TaxId:10090]
  Gene: H2-Ab1
  Database cross-references and differences (RAF-indexed):
  • PDB 3MBE
• Chain 'H':
  Compound: TCR 21.3 beta chain
  Species: Mus musculus [TaxId:10090]
  Gene: H2-Ab1
  Database cross-references and differences (RAF-indexed):
  • PDB 3MBE
• Chain 'P':
  Compound: peptide HEL 11-27
  Species: Gallus gallus, synthetic [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P00698 (0-End)
    • conflict (0)
• Chain 'Q':
  Compound: peptide HEL 11-27
  Species: Gallus gallus, synthetic [TaxId:9031]
  Database cross-references and differences (RAF-indexed):
  • Uniprot P00698 (0-End)
    • conflict (0)
• Heterogens: NAG

PDB Chain Sequences:

• Chain 'A':
  No sequence available.
  
  
• Chain 'B':
  No sequence available.
  
  
• Chain 'C':
  No sequence available.
  
  
• Chain 'D':
  Sequence, based on SEQRES records: (download)
  

  >3mbeD (D:)
  eaavtqsprskvavtggkvtlschqtnnhdymywyrqdtghglrlihysyvadstekgdi
  pdgykasrpsqenfslilelaslsqtavyfcasswdragntlyfgegsrlivvedlrnvt
  ppkvslfepskaeiankqkatlvclargffpdhvelswwvngkevhsgvctdpqaykesn
  ysyslssrlrvsatfwhnprnhfrcqvqfhglseedkwpegspkpvtqnisaeawgradc
  gitsasyhqssadlvprgs
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3mbeD (D:)
  avtqsprskvavtggkvtlschqtnnhdymywyrqdtghglrlihysyvadstekgdipd
  gykasrpsqenfslilelaslsqtavyfcasswdragntlyfgegsrlivvedlrnvtpp
  kvslfepskaeiankqkatlvclargffpdhvelswwvngkevhsgvctdpqaykesnys
  yslssrlrvsatfwhnprnhfrcqvqfhglseedkwpegspkpvtqnisaeawgra
  

  
  
• Chain 'E':
  No sequence available.
  
  
• Chain 'F':
  Sequence, based on SEQRES records: (download)
  

  >3mbeF (F:)
  gsgsgsgdserhfvhqfkgecyftngtqrirlvtryiynreeylrfdsdvgeyravtelg
  rhsaeyynkqylertraeldtacrhnyeetevptslrrleqpnvaislsrtealnhhntl
  vcsvtdfypakikvrwfrngqeetvgvsstqlirngdwtfqvlvmlemtphqgevytchv
  ehpslkspitvewssadlvpr
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >3mbeF (F:)
  rhfvhqfkgecyftngtqrirlvtryiynreeylrfdsdvgeyravtelgrhsaeyynkq
  ylertraeldtacrhnyeetevptslrrleqpnvaislsrhntlvcsvtdfypakikvrw
  frngqeetvgvsstqlirngdwtfqvlvmlemtphqgevytchvehpslkspitvews
  

  
  
• Chain 'G':
  No sequence available.
  
  
• Chain 'H':
  No sequence available.
  
  
• Chain 'P':
  No sequence available.
  
  
• Chain 'Q':
  No sequence available.