SCOPe 2.07: Structural Classification of Proteins

PDB entry 3m8a

View 3m8a on RCSB PDB site
Description: Crystal Structure of Swine Flu Virus NS1 N-Terminal RNA Binding Domain from H1N1 Influenza A/California/07/2009
Class: viral protein
Keywords: NS1, N-terminal RNA binding Domain, Influenza A virus, H1N1, Host cytoplasm, Host nucleus, Host-virus interaction, Interferon antiviral system evasion, RNA-binding, Center for Structural Genomics of Infectious Diseases, CSGID, VIRAL PROTEIN
Deposited on 2010-03-17, released 2010-04-28
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-12-14, with a file datestamp of 2011-12-09.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.172
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Database cross-references and differences (RAF-indexed):
- Uniprot C3W611 (3-End)
Domains in SCOPe 2.07: d3m8aa_
Chain 'B':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Database cross-references and differences (RAF-indexed):
- Uniprot C3W611 (3-End)
Domains in SCOPe 2.07: d3m8ab_
Chain 'C':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Database cross-references and differences (RAF-indexed):
- Uniprot C3W611 (3-End)
  - expression tag (2)
Domains in SCOPe 2.07: d3m8ac1, d3m8ac2
Chain 'D':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Database cross-references and differences (RAF-indexed):
- Uniprot C3W611 (3-End)
Domains in SCOPe 2.07: d3m8ad_
Chain 'E':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Database cross-references and differences (RAF-indexed):
- Uniprot C3W611 (3-End)
Domains in SCOPe 2.07: d3m8ae_
Chain 'F':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Database cross-references and differences (RAF-indexed):
- Uniprot C3W611 (3-End)
Domains in SCOPe 2.07: d3m8af_
Chain 'G':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Database cross-references and differences (RAF-indexed):
- Uniprot C3W611 (3-End)
  - expression tag (2)
Domains in SCOPe 2.07: d3m8ag1, d3m8ag2
Chain 'H':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Database cross-references and differences (RAF-indexed):
- Uniprot C3W611
Domains in SCOPe 2.07: d3m8ah_
Chain 'I':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Database cross-references and differences (RAF-indexed):
- Uniprot C3W611 (3-End)
Domains in SCOPe 2.07: d3m8ai_
Chain 'J':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Database cross-references and differences (RAF-indexed):
- Uniprot C3W611 (3-End)
  - expression tag (2)
Domains in SCOPe 2.07: d3m8aj1, d3m8aj2
Chain 'K':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Database cross-references and differences (RAF-indexed):
- Uniprot C3W611 (3-End)
Domains in SCOPe 2.07: d3m8ak_
Chain 'L':
Compound: nonstructural protein 1
Species: Influenza A virus [TaxId:641809]
Database cross-references and differences (RAF-indexed):
- Uniprot C3W611 (3-End)
  - expression tag (2)
Domains in SCOPe 2.07: d3m8al1, d3m8al2
Heterogens: ACT, MLI, NA, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>3m8aA (A:)
snamdsntmssfqvdcflwhirkrfadnglgdapfldrlrrdqkslkgrgntlgldieta
tlvgkqivewilkees