PDB entry 3m5y
View 3m5y on RCSB PDB site
Description: Crystal structure of the mutant V182A,V201A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum
Class: lyase
Keywords: orotidine 5'-monophosphate decarboxylase, mutant V182A, V201A, LYASE
Deposited on
2010-03-14, released
2010-06-16
The last revision prior to the SCOPe 2.08 freeze date was dated
2010-06-16, with a file datestamp of
2010-06-11.
Experiment type: XRAY
Resolution: 1.46 Å
R-factor: 0.225
AEROSPACI score: 0.6
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: orotidine 5'-phosphate decarboxylase
Species: Methanothermobacter thermautotrophicus str. Delta H [TaxId:187420]
Gene: pyrF, MTH_129
Database cross-references and differences (RAF-indexed):
- Uniprot O26232
- engineered (100)
- engineered (200)
Domains in SCOPe 2.08: d3m5ya_ - Chain 'B':
Compound: orotidine 5'-phosphate decarboxylase
Species: Methanothermobacter thermautotrophicus str. Delta H [TaxId:187420]
Gene: pyrF, MTH_129
Database cross-references and differences (RAF-indexed):
- Uniprot O26232
- engineered (100)
- engineered (200)
Domains in SCOPe 2.08: d3m5yb_ - Heterogens: GOL, FMT, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3m5yA (A:)
mrsrrvdvmdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefr
krfgcriiadfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrev
flltemshpgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflisp
gagaqggdpgetlrfadaiiagrsiyladnpaaaaagiiesikdllnp
Sequence, based on observed residues (ATOM records): (download)
>3m5yA (A:)
rvdvmdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefrkrfg
criiadfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrevfllt
emshpgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflispgpge
tlrfadaiiagrsiyladnpaaaaagiiesik
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3m5yB (B:)
mrsrrvdvmdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefr
krfgcriiadfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrev
flltemshpgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflisp
gagaqggdpgetlrfadaiiagrsiyladnpaaaaagiiesikdllnp
Sequence, based on observed residues (ATOM records): (download)
>3m5yB (B:)
rvdvmdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefrkrfg
criiadfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrevfllt
emshpgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflispgpge
tlrfadaiiagrsiyladnpaaaaagiiesik