PDB entry 3lni

View 3lni on RCSB PDB site
Description: Crystal structure of E-cadherin EC12 E89A
Class: cell adhesion
Keywords: cadherin, Cell adhesion, Cell junction, Cell membrane, Cleavage on pair of basic residues, Glycoprotein, Membrane, Transmembrane
Deposited on 2010-02-02, released 2010-03-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.169
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cadherin-1
    Species: Mus musculus [TaxId:10090]
    Gene: Cdh1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09803 (0-212)
      • engineered (88)
    Domains in SCOPe 2.08: d3lnia1, d3lnia2
  • Chain 'B':
    Compound: Cadherin-1
    Species: Mus musculus [TaxId:10090]
    Gene: Cdh1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09803 (Start-212)
      • engineered (88)
    Domains in SCOPe 2.08: d3lnib1, d3lnib2
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3lniA (A:)
dwvippiscpenekgefpknlvqiksnrdketkvfysitgqgadkppvgvfiieretgwl
kvtqpldreaiakyilyshavssngeavadpmeivitvtdqndnrpeftqevfegsvaeg
avpgtsvmkvsatdadddvntynaaiaytivsqdpelphknmftvnrdtgvisvltsgld
resyptytlvvqaadlqgeglsttakavitvkd

    Sequence, based on observed residues (ATOM records): (download) 
    >3lniA (A:)
dwvippiscpenekgefpknlvqiksnretkvfysitgqgadkppvgvfiieretgwlkv
tqpldreaiakyilyshavssngeavadpmeivitvtdqndnrpeftqevfegsvaegav
pgtsvmkvsatdadddvntynaaiaytivsqdpelphknmftvnrdtgvisvltsgldre
syptytlvvqaadlqgeglsttakavitvkd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3lniB (B:)
dwvippiscpenekgefpknlvqiksnrdketkvfysitgqgadkppvgvfiieretgwl
kvtqpldreaiakyilyshavssngeavadpmeivitvtdqndnrpeftqevfegsvaeg
avpgtsvmkvsatdadddvntynaaiaytivsqdpelphknmftvnrdtgvisvltsgld
resyptytlvvqaadlqgeglsttakavitvkd

    Sequence, based on observed residues (ATOM records): (download) 
    >3lniB (B:)
wvippiscpenekgefpknlvqikstkvfysitgqgadkppvgvfiieretgwlkvtqpl
dreaiakyilyshavssngeavadpmeivitvtdqndnrpeftqevfegsvaegavpgts
vmkvsatdadddvntynaaiaytivsqdpelphknmftvnrdtgvisvltsgldresypt
ytlvvqaadlqgeglsttakavitvkd