PDB entry 3lnf

View 3lnf on RCSB PDB site
Description: Crystal structure of E-cadherin EC12 K14EW2A
Class: cell adhesion
Keywords: cadherin, Calcium, Cell adhesion, Cell junction, Cell membrane, Glycoprotein, Transmembrane
Deposited on 2010-02-02, released 2010-03-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2010-03-16, with a file datestamp of 2010-03-12.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.187
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cadherin-1
    Species: Mus musculus [TaxId:10090]
    Gene: Cdh1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09803 (Start-212)
      • engineered (13)
    Domains in SCOPe 2.07: d3lnfa1, d3lnfa2
  • Chain 'B':
    Compound: Cadherin-1
    Species: Mus musculus [TaxId:10090]
    Gene: Cdh1
    Database cross-references and differences (RAF-indexed):
    • Uniprot P09803 (Start-212)
      • engineered (13)
    Domains in SCOPe 2.07: d3lnfb1, d3lnfb2
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3lnfA (A:)
    davippiscpeneegefpknlvqiksnrdketkvfysitgqgadkppvgvfiieretgwl
    kvtqpldreaiakyilyshavssngeavedpmeivitvtdqndnrpeftqevfegsvaeg
    avpgtsvmkvsatdadddvntynaaiaytivsqdpelphknmftvnrdtgvisvltsgld
    resyptytlvvqaadlqgeglsttakavitvkd
    

    Sequence, based on observed residues (ATOM records): (download)
    >3lnfA (A:)
    vippiscpeneegefpknlvqiksnrdketkvfysitgqgadkppvgvfiieretgwlkv
    tqpldreaiakyilyshavssngeavedpmeivitvtdqndnrpeftqevfegsvaegav
    pgtsvmkvsatdadddvntynaaiaytivsqdpelphknmftvnrdtgvisvltsgldre
    syptytlvvqaadlqgeglsttakavitvkd
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3lnfB (B:)
    davippiscpeneegefpknlvqiksnrdketkvfysitgqgadkppvgvfiieretgwl
    kvtqpldreaiakyilyshavssngeavedpmeivitvtdqndnrpeftqevfegsvaeg
    avpgtsvmkvsatdadddvntynaaiaytivsqdpelphknmftvnrdtgvisvltsgld
    resyptytlvvqaadlqgeglsttakavitvkd
    

    Sequence, based on observed residues (ATOM records): (download)
    >3lnfB (B:)
    ppiscpeneegefpknlvqiksntkvfysitgqgadkppvgvfiieretgwlkvtqpldr
    eaiakyilyshavssngeavedpmeivitvtdqndnrpeftqevfegsvaegavpgtsvm
    kvsatdadddvntynaaiaytivsqdpelphknmftvnrdtgvisvltsgldresyptyt
    lvvqaadlqgeglsttakavitvkd