PDB entry 3lme

View 3lme on RCSB PDB site
Description: Structure of probable translation initiation inhibitor from (RPA2473) from Rhodopseudomonas palustris
Class: translation
Keywords: structural genomics, translation initiation inhibitor, RPA2473, PSI-2, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, TRANSLATION
Deposited on 2010-01-29, released 2010-03-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2021-02-10, with a file datestamp of 2021-02-05.
Experiment type: XRAY
Resolution: 2.74 Å
R-factor: N/A
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Possible translation initiation inhibitor
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Gene: RPA2473
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6N6Z0 (3-129)
      • expression tag (1-2)
      • engineered (34)
    Domains in SCOPe 2.08: d3lmea1, d3lmea2
  • Chain 'B':
    Compound: Possible translation initiation inhibitor
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Gene: RPA2473
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6N6Z0 (3-129)
      • expression tag (1-2)
      • engineered (34)
    Domains in SCOPe 2.08: d3lmeb1, d3lmeb2
  • Chain 'C':
    Compound: Possible translation initiation inhibitor
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Gene: RPA2473
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6N6Z0 (3-End)
      • expression tag (1-2)
      • engineered (34)
    Domains in SCOPe 2.08: d3lmec1, d3lmec2
  • Chain 'D':
    Compound: Possible translation initiation inhibitor
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Gene: RPA2473
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6N6Z0 (3-129)
      • expression tag (1-2)
      • engineered (34)
    Domains in SCOPe 2.08: d3lmed1, d3lmed2
  • Chain 'E':
    Compound: Possible translation initiation inhibitor
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Gene: RPA2473
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6N6Z0 (3-129)
      • expression tag (1-2)
      • engineered (34)
    Domains in SCOPe 2.08: d3lmee1, d3lmee2
  • Chain 'F':
    Compound: Possible translation initiation inhibitor
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Gene: RPA2473
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6N6Z0 (3-End)
      • expression tag (1-2)
      • engineered (34)
    Domains in SCOPe 2.08: d3lmef1, d3lmef2
  • Chain 'G':
    Compound: Possible translation initiation inhibitor
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Gene: RPA2473
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6N6Z0 (3-129)
      • expression tag (1-2)
      • engineered (34)
    Domains in SCOPe 2.08: d3lmeg1, d3lmeg2
  • Chain 'H':
    Compound: Possible translation initiation inhibitor
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Gene: RPA2473
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6N6Z0 (3-129)
      • expression tag (1-2)
      • engineered (34)
    Domains in SCOPe 2.08: d3lmeh1, d3lmeh2
  • Chain 'I':
    Compound: Possible translation initiation inhibitor
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Gene: RPA2473
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6N6Z0 (3-End)
      • expression tag (1-2)
      • engineered (34)
    Domains in SCOPe 2.08: d3lmei1, d3lmei2
  • Chain 'J':
    Compound: Possible translation initiation inhibitor
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Gene: RPA2473
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6N6Z0 (3-129)
      • expression tag (1-2)
      • engineered (34)
    Domains in SCOPe 2.08: d3lmej1, d3lmej2
  • Chain 'K':
    Compound: Possible translation initiation inhibitor
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Gene: RPA2473
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6N6Z0 (3-129)
      • expression tag (1-2)
      • engineered (34)
    Domains in SCOPe 2.08: d3lmek1, d3lmek2
  • Chain 'L':
    Compound: Possible translation initiation inhibitor
    Species: Rhodopseudomonas palustris [TaxId:1076]
    Gene: RPA2473
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q6N6Z0 (3-End)
      • expression tag (1-2)
      • engineered (34)
    Domains in SCOPe 2.08: d3lmel1, d3lmel2
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3lmeA (A:)
mslkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnml
aaaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdia
eidgtfyapaeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmeA (A:)
slkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnmla
aaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdiae
idgtfyapa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3lmeB (B:)
mslkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnml
aaaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdia
eidgtfyapaeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmeB (B:)
slkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnmla
aaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdiae
idgtfyapa

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3lmeC (C:)
mslkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnml
aaaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdia
eidgtfyapaeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmeC (C:)
slkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnmla
aaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdiae
idgtfya

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3lmeD (D:)
mslkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnml
aaaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdia
eidgtfyapaeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmeD (D:)
slkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnmla
aaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdiae
idgtfyapa

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3lmeE (E:)
mslkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnml
aaaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdia
eidgtfyapaeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmeE (E:)
slkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnmla
aaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdiae
idgtfyapa

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3lmeF (F:)
mslkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnml
aaaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdia
eidgtfyapaeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmeF (F:)
slkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnmla
aaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdiae
idgtfya

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >3lmeG (G:)
mslkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnml
aaaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdia
eidgtfyapaeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmeG (G:)
slkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnmla
aaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdiae
idgtfyapa

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >3lmeH (H:)
mslkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnml
aaaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdia
eidgtfyapaeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmeH (H:)
slkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnmla
aaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdiae
idgtfyapa

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >3lmeI (I:)
mslkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnml
aaaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdia
eidgtfyapaeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmeI (I:)
slkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnmla
aaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdiae
idgtfyap

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >3lmeJ (J:)
mslkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnml
aaaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdia
eidgtfyapaeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmeJ (J:)
slkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnmla
aaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdiae
idgtfyapa

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >3lmeK (K:)
mslkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnml
aaaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdia
eidgtfyapaeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmeK (K:)
slkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnmla
aaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdiae
idgtfyapa

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >3lmeL (L:)
mslkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnml
aaaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdia
eidgtfyapaeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3lmeL (L:)
slkiiaptdktitpsgtwsigaragdfvfiggmhgtdrvtgkmvdgdearirrmfdnmla
aaeaagatkadavrltvfvtdvakyrpvvnkvqkdiwgdgpypprtvlqvpaldqgdiae
idgtfyap