PDB entry 3lhv
View 3lhv on RCSB PDB site
Description: Crystal structure of the mutant V182A.I199A.V201A of orotidine 5'-monophosphate decarboxylase from Methanobacterium thermoautotrophicum complexed with inhibitor BMP
Class: lyase
Keywords: mutant V182A.I199A.V201A, 6-hydroxyuridine-5'-phosphate, Decarboxylase, Pyrimidine biosynthesis, LYASE
Deposited on
2010-01-23, released
2010-06-16
The last revision prior to the SCOPe 2.01 freeze date was dated
2010-06-16, with a file datestamp of
2010-06-11.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: 0.231
AEROSPACI score: 0.65
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: orotidine 5'-phosphate decarboxylase
Species: METHANOTHERMOBACTER THERMAUTOTROPHICUS [TaxId:187420]
Gene: pyrF, MTH_129
Database cross-references and differences (RAF-indexed):
- Uniprot O26232
- engineered (100)
- engineered (181)
- engineered (198)
- engineered (200)
Domains in SCOPe 2.01: d3lhva_ - Chain 'B':
Compound: orotidine 5'-phosphate decarboxylase
Species: METHANOTHERMOBACTER THERMAUTOTROPHICUS [TaxId:187420]
Gene: pyrF, MTH_129
Database cross-references and differences (RAF-indexed):
- Uniprot O26232
- engineered (100)
- engineered (181)
- engineered (198)
- engineered (200)
Domains in SCOPe 2.01: d3lhvb_ - Chain 'C':
Compound: orotidine 5'-phosphate decarboxylase
Species: METHANOTHERMOBACTER THERMAUTOTROPHICUS [TaxId:187420]
Gene: pyrF, MTH_129
Database cross-references and differences (RAF-indexed):
- Uniprot O26232
- engineered (100)
- engineered (181)
- engineered (198)
- engineered (200)
Domains in SCOPe 2.01: d3lhvc_ - Chain 'D':
Compound: orotidine 5'-phosphate decarboxylase
Species: METHANOTHERMOBACTER THERMAUTOTROPHICUS [TaxId:187420]
Gene: pyrF, MTH_129
Database cross-references and differences (RAF-indexed):
- Uniprot O26232
- engineered (100)
- engineered (181)
- engineered (198)
- engineered (200)
Domains in SCOPe 2.01: d3lhvd_ - Heterogens: BMQ, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3lhvA (A:)
mrsrrvdvmdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefr
krfgcriiadfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrev
flltemshpgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflisp
gagaqggdpgetlrfadaaiagrsiyladnpaaaaagiiesikdllnp
Sequence, based on observed residues (ATOM records): (download)
>3lhvA (A:)
vmdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefrkrfgcri
iadfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrevflltems
hpgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflispgagaqgg
dpgetlrfadaaiagrsiyladnpaaaaagiiesikdl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3lhvB (B:)
mrsrrvdvmdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefr
krfgcriiadfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrev
flltemshpgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflisp
gagaqggdpgetlrfadaaiagrsiyladnpaaaaagiiesikdllnp
Sequence, based on observed residues (ATOM records): (download)
>3lhvB (B:)
mdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefrkrfgcrii
adfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrevflltemsh
pgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflispgagaqggd
pgetlrfadaaiagrsiyladnpaaaaagiiesikdl
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3lhvC (C:)
mrsrrvdvmdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefr
krfgcriiadfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrev
flltemshpgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflisp
gagaqggdpgetlrfadaaiagrsiyladnpaaaaagiiesikdllnp
Sequence, based on observed residues (ATOM records): (download)
>3lhvC (C:)
vmdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefrkrfgcri
iadfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrevflltems
hpgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflispgagaqgg
dpgetlrfadaaiagrsiyladnpaaaaagiiesikdl
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3lhvD (D:)
mrsrrvdvmdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefr
krfgcriiadfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrev
flltemshpgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflisp
gagaqggdpgetlrfadaaiagrsiyladnpaaaaagiiesikdllnp
Sequence, based on observed residues (ATOM records): (download)
>3lhvD (D:)
mdvmnrlilamdlmnrddalrvtgevreyidtvkigyplvlsegmdiiaefrkrfgcrii
adfkvadipetnekicratfkagadaiivhgfpgadsvraclnvaeemgrevflltemsh
pgaemfiqgaadeiarmgvdlgvknyvgpstrperlsrlreiigqdsflispgagaqggd
pgetlrfadaaiagrsiyladnpaaaaagiiesikdl