PDB entry 3lev
View 3lev on RCSB PDB site
Description: HIV-1 antibody 2F5 in complex with epitope scaffold ES2
Class: immune system
Keywords: hiv-1, gp41, monoclonal antibody, 2f5, scaffold, epitope, transplant, graft, sigma factor, re-elicitation, immune system, vaccine design
Deposited on
2010-01-15, released
2010-09-29
The last revision prior to the SCOPe 2.07 freeze date was dated
2010-11-24, with a file datestamp of
2010-11-19.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.206
AEROSPACI score: 0.31
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: RNA polymerase sigma factor
Species: Thermus aquaticus [TaxId:271]
Gene: SIGMA FACTOR SIGA
Database cross-references and differences (RAF-indexed):
- Uniprot Q9EZJ8 (0-End)
- engineered (12)
- engineered (14-15)
- engineered (17-20)
- engineered (22-24)
- engineered (26)
- engineered (62)
- engineered (154)
- engineered (156)
- Chain 'H':
Compound: 2f5 antibody heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3levh1, d3levh2 - Chain 'L':
Compound: 2f5 antibody light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3levl1, d3levl2 - Heterogens: 1PE, ATP, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>3levH (H:)
ritlkesgpplvkptqtltltcsfsgfslsdfgvgvgwirqppgkalewlaiiysdddkr
yspslntrltitkdtsknqvvlvmtrvspvdtatyfcahrrgpttlfgvpiargpvnamd
vwgqgitvtisststkgpsvfplapsskstsggtaalgclvkdyfpepvtvswnsgalts
gvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkkvepkscdk
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>3levL (L:)
alqltqspsslsasvgdrititcrasqgvtsalawyrqkpgsppqlliydasslesgvps
rfsgsgsgteftltistlrpedfatyycqqlhfyphtfgggtrvdvrrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec