PDB entry 3kyo

View 3kyo on RCSB PDB site
Description: Crystal structure of HLA-G presenting KLPAQFYIL peptide
Class: immune system
Keywords: Human leukocyte antigen, major histocompatibility complex, immune response, MHC I, IMMUNE SYSTEM
Deposited on 2009-12-06, released 2010-02-23
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-02-26, with a file datestamp of 2014-02-21.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.184
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: MHC class I antigen
  Species: Homo sapiens [TaxId:9606]
  Gene: HLA-G
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9MYA2 (0-272)
    • engineered (40)
• Chain 'B':
  Compound: Beta-2-microglobulin
  Species: Homo sapiens [TaxId:9606]
  Gene: B2M, CDABP0092, HDCMA22P
  Database cross-references and differences (RAF-indexed):
  • Uniprot P61769 (1-99)
    • initiating methionine (0)
  Domains in SCOPe 2.05: d3kyob_
• Chain 'C':
  Compound: MHC class I antigen
  Species: Homo sapiens [TaxId:9606]
  Gene: HLA-G
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9MYA2 (0-272)
    • engineered (40)
• Chain 'D':
  Compound: Beta-2-microglobulin
  Species: Homo sapiens [TaxId:9606]
  Gene: B2M, CDABP0092, HDCMA22P
  Database cross-references and differences (RAF-indexed):
  • Uniprot P61769 (1-99)
    • initiating methionine (0)
  Domains in SCOPe 2.05: d3kyod_
• Chain 'P':
  Compound: KLPAQFYIL peptide
  Species: synthetic, synthetic
  Database cross-references and differences (RAF-indexed):
  • PDB 3KYO (0-8)
• Chain 'Q':
  Compound: KLPAQFYIL peptide
  Species: synthetic, synthetic
  Database cross-references and differences (RAF-indexed):
  • PDB 3KYO (0-8)
• Heterogens: CO, HOH

PDB Chain Sequences:

• Chain 'A':
  No sequence available.
  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >3kyoB (B:)
  miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
  wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
  

  
  
• Chain 'C':
  No sequence available.
  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >3kyoD (D:)
  miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
  wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
  

  
  
• Chain 'P':
  No sequence available.
  
  
• Chain 'Q':
  No sequence available.