PDB entry 3ku8

View 3ku8 on RCSB PDB site
Description: CcdBVfi:GyrA14Ec
Class: toxin/isomerase
Keywords: ALPHA+BETA, SH3 domain, Topoisomerase, TOXIN-ISOMERASE complex
Deposited on 2009-11-27, released 2010-11-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-05-30, with a file datestamp of 2012-05-25.
Experiment type: XRAY
Resolution: 1.93 Å
R-factor: 0.184
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA gyrase subunit A
    Species: Escherichia coli [TaxId:83333]
    Gene: gyrase
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ku8a_
  • Chain 'B':
    Compound: DNA gyrase subunit A
    Species: Escherichia coli [TaxId:83333]
    Gene: gyrase
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ku8b_
  • Chain 'C':
    Compound: ccdb
    Species: Vibrio fischeri [TaxId:668]
    Gene: CCDB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ku8c_
  • Chain 'D':
    Compound: ccdb
    Species: Vibrio fischeri [TaxId:668]
    Gene: CCDB
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ku8d_
  • Heterogens: SO4, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ku8A (A:)
mgsshhhhhhssglvprgshmtrrtifelrkardrahilealavalanidpiielirhap
tpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildl
rlqkltgleheklldeykelldqiaellrilgsadr

    Sequence, based on observed residues (ATOM records): (download) 
    >3ku8A (A:)
trrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaa
mleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykell
dqiaellrilgsadr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ku8B (B:)
mgsshhhhhhssglvprgshmtrrtifelrkardrahilealavalanidpiielirhap
tpaeaktalvanpwqlgnvaamleragddaarpewlepefgvrdglyylteqqaqaildl
rlqkltgleheklldeykelldqiaellrilgsadr

    Sequence, based on observed residues (ATOM records): (download) 
    >3ku8B (B:)
trrtifelrkardrahilealavalanidpiielirhaptpaeaktalvanpwqlgnvaa
mleragddaarpewlepefgvrdglyylteqqaqaildlrlqkltgleheklldeykell
dqiaellrilgsadr

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3ku8C (C:)
msqftlyknkdkssaktypyfvdvqsdlldnlntrlvipltpielldkkapshlcptihi
degdfimltqqmtsvpvkilsepvnelstfrneiiaaidflitgi

    Sequence, based on observed residues (ATOM records): (download) 
    >3ku8C (C:)
sqftlyknkdkssaktypyfvdvqsdlldnlntrlvipltpiepshlcptihidegdfim
ltqqmtsvpvkilsepvnelstfrneiiaaidflitgi

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3ku8D (D:)
msqftlyknkdkssaktypyfvdvqsdlldnlntrlvipltpielldkkapshlcptihi
degdfimltqqmtsvpvkilsepvnelstfrneiiaaidflitgi

    Sequence, based on observed residues (ATOM records): (download) 
    >3ku8D (D:)
sqftlyknkdkssaktypyfvdvqsdlldnlntrlvipltpiepshlcptihidegdfim
ltqqmtsvpvkilsepvnelstfrneiiaaidflitgi