PDB entry 3ks0
View 3ks0 on RCSB PDB site
Description: Crystal structure of the heme domain of flavocytochrome b2 in complex with Fab B2B4
Class: oxidoreductase
Keywords: electron transfer, epitope, domain mobility, flavocytochrome b2, antibody, Fab, heme domain, Electron transport, Flavoprotein, FMN, Heme, Metal-binding, Mitochondrion, Oxidoreductase, Respiratory chain, Transit peptide, Transport
Deposited on
2009-11-20, released
2010-05-26
The last revision prior to the SCOPe 2.03 freeze date was dated
2010-08-18, with a file datestamp of
2010-08-13.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.218
AEROSPACI score: 0.26
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Cytochrome b2, mitochondrial
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: CYB2, YML054C, YM9958.08C
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3ks0a_ - Chain 'B':
Compound: Cytochrome b2, mitochondrial
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: CYB2, YML054C, YM9958.08C
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3ks0b_ - Chain 'H':
Compound: Fragment Antigen Binding B2B4
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'J':
Compound: heme domain of flavocytochrome b2
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3ks0j1, d3ks0j2 - Chain 'K':
Compound: Fragment Antigen Binding B2B4
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: heme domain of flavocytochrome b2
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3ks0l1, d3ks0l2 - Heterogens: HEM, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3ks0A (A:)
mnkqkispaevakhnkpddcwvvingyvydltrflpnhpggqdvikfnagkdvtaifepl
hapnvidkyiapekklgplqgsmppelvcppyapg
Sequence, based on observed residues (ATOM records): (download)
>3ks0A (A:)
mnkqkispaevakhnkpddcwvvingyvydltrflpnhpggqdvikfnagkdvtaifepl
hapnvidkyiapekklgplqgsmppelvcppy
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3ks0B (B:)
mnkqkispaevakhnkpddcwvvingyvydltrflpnhpggqdvikfnagkdvtaifepl
hapnvidkyiapekklgplqgsmppelvcppyapg
Sequence, based on observed residues (ATOM records): (download)
>3ks0B (B:)
mnkqkispaevakhnkpddcwvvingyvydltrflpnhpggqdvikfnagkdvtaifepl
hapnvidkyiapekklgplqgsmppelvcppy
- Chain 'H':
No sequence available.
- Chain 'J':
Sequence, based on SEQRES records: (download)
>3ks0J (J:)
qavvtqesalttspgetvtltcrsstgavttsnyanwvqekpdhlftgliggtnkrapgv
parfsgsligdkaaltitgaqtedeaiyfcalwdsnhlvfgggtkltvlgqpksspsvtl
fppsseeletnkatlvctitdfypgvvtvdwkvdgtpvtqgmettqpskqsnnkymassy
ltltarawerhssyscqvtheghtvekslspadc
Sequence, based on observed residues (ATOM records): (download)
>3ks0J (J:)
qavvtqesalttspgetvtltcrsstgavttsnyanwvqekpdhlftgliggtnkrapgv
parfsgsligdkaaltitgaqtedeaiyfcalwdsnhlvfgggtkltvlgqpksspsvtl
fppsseeletnkatlvctitdfypgvvtvdwkvdgtpvtqgmettqpskqsnnkymassy
ltltarawerhssyscqvtheghtvekslspa
- Chain 'K':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>3ks0L (L:)
qavvtqesalttspgetvtltcrsstgavttsnyanwvqekpdhlftgliggtnkrapgv
parfsgsligdkaaltitgaqtedeaiyfcalwdsnhlvfgggtkltvlgqpksspsvtl
fppsseeletnkatlvctitdfypgvvtvdwkvdgtpvtqgmettqpskqsnnkymassy
ltltarawerhssyscqvtheghtvekslspadc
Sequence, based on observed residues (ATOM records): (download)
>3ks0L (L:)
qavvtqesalttspgetvtltcrsstgavttsnyanwvqekpdhlftgliggtnkrapgv
parfsgsligdkaaltitgaqtedeaiyfcalwdsnhlvfgggtkltvlgqpksspsvtl
fppsseeletnkatlvctitdfypgvvtvdwkvdgtpvtqgmettqpskqsnnkymassy
ltltarawerhssyscqvtheghtvekslspa