PDB entry 3kru

View 3kru on RCSB PDB site
Description: Crystal Structure of the Thermostable Old Yellow Enzyme from Thermoanaerobacter pseudethanolicus E39
Class: oxidoreductase
Keywords: homotetramer, dimer of dimers, Tim barrel, thermophilic, old yellow enzyme, ene-reductase activity, OXIDOREDUCTASE
Deposited on 2009-11-19, released 2009-12-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2010-06-23, with a file datestamp of 2010-06-18.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.153
AEROSPACI score: 0.62 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NADH:flavin oxidoreductase/NADH oxidase
    Species: Thermoanaerobacter pseudethanolicus ATCC 33223 [TaxId:340099]
    Gene: Teth39_0012, ZP_00777979
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3krua_
  • Chain 'B':
    Compound: NADH:flavin oxidoreductase/NADH oxidase
    Species: Thermoanaerobacter pseudethanolicus ATCC 33223 [TaxId:340099]
    Gene: Teth39_0012, ZP_00777979
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3krub_
  • Chain 'C':
    Compound: NADH:flavin oxidoreductase/NADH oxidase
    Species: Thermoanaerobacter pseudethanolicus ATCC 33223 [TaxId:340099]
    Gene: Teth39_0012, ZP_00777979
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kruc_
  • Chain 'D':
    Compound: NADH:flavin oxidoreductase/NADH oxidase
    Species: Thermoanaerobacter pseudethanolicus ATCC 33223 [TaxId:340099]
    Gene: Teth39_0012, ZP_00777979
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3krud_
  • Heterogens: FMN, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3kruA (A:)
msilhmplkikditiknrimmspmcmysastdgmpndwhivhyatraiggvglimqeata
vesrgritdhdlgiwndeqvkelkkivdickangavmgiqlahagrkcnisyedvvgpsp
ikagdryklprelsveeiksivkafgeaakranlagydvveihaahgyliheflsplsnk
rkdeygnsienrarflievidevrknwpenkpifvrvsaddymegginidmmveyinmik
dkvdlidvssggllnvdinlypgyqvkyaetikkrcniktsavglittqelaeeilsner
adlvalgrellrnpywvlhtytskedwpkqyerafkkhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3kruA (A:)
silhmplkikditiknrimmspmcmysastdgmpndwhivhyatraiggvglimqeatav
esrgritdhdlgiwndeqvkelkkivdickangavmgiqlahagrkcnisyedvvgpspi
kagdryklprelsveeiksivkafgeaakranlagydvveihaahgyliheflsplsnkr
kdeygnsienrarflievidevrknwpenkpifvrvsaddymegginidmmveyinmikd
kvdlidvssggllnvdinlypgyqvkyaetikkrcniktsavglittqelaeeilsnera
dlvalgrellrnpywvlhtytskedwpkqyerafk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3kruB (B:)
msilhmplkikditiknrimmspmcmysastdgmpndwhivhyatraiggvglimqeata
vesrgritdhdlgiwndeqvkelkkivdickangavmgiqlahagrkcnisyedvvgpsp
ikagdryklprelsveeiksivkafgeaakranlagydvveihaahgyliheflsplsnk
rkdeygnsienrarflievidevrknwpenkpifvrvsaddymegginidmmveyinmik
dkvdlidvssggllnvdinlypgyqvkyaetikkrcniktsavglittqelaeeilsner
adlvalgrellrnpywvlhtytskedwpkqyerafkkhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3kruB (B:)
silhmplkikditiknrimmspmcmysastdgmpndwhivhyatraiggvglimqeatav
esrgritdhdlgiwndeqvkelkkivdickangavmgiqlahagrkcnisyedvvgpspi
kagdryklprelsveeiksivkafgeaakranlagydvveihaahgyliheflsplsnkr
kdeygnsienrarflievidevrknwpenkpifvrvsaddymegginidmmveyinmikd
kvdlidvssggllnvdinlypgyqvkyaetikkrcniktsavglittqelaeeilsnera
dlvalgrellrnpywvlhtytskedwpkqyerafk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3kruC (C:)
msilhmplkikditiknrimmspmcmysastdgmpndwhivhyatraiggvglimqeata
vesrgritdhdlgiwndeqvkelkkivdickangavmgiqlahagrkcnisyedvvgpsp
ikagdryklprelsveeiksivkafgeaakranlagydvveihaahgyliheflsplsnk
rkdeygnsienrarflievidevrknwpenkpifvrvsaddymegginidmmveyinmik
dkvdlidvssggllnvdinlypgyqvkyaetikkrcniktsavglittqelaeeilsner
adlvalgrellrnpywvlhtytskedwpkqyerafkkhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3kruC (C:)
silhmplkikditiknrimmspmcmysastdgmpndwhivhyatraiggvglimqeatav
esrgritdhdlgiwndeqvkelkkivdickangavmgiqlahagrkcnisyedvvgpspi
kagdryklprelsveeiksivkafgeaakranlagydvveihaahgyliheflsplsnkr
kdeygnsienrarflievidevrknwpenkpifvrvsaddymegginidmmveyinmikd
kvdlidvssggllnvdinlypgyqvkyaetikkrcniktsavglittqelaeeilsnera
dlvalgrellrnpywvlhtytskedwpkqyeraf

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3kruD (D:)
msilhmplkikditiknrimmspmcmysastdgmpndwhivhyatraiggvglimqeata
vesrgritdhdlgiwndeqvkelkkivdickangavmgiqlahagrkcnisyedvvgpsp
ikagdryklprelsveeiksivkafgeaakranlagydvveihaahgyliheflsplsnk
rkdeygnsienrarflievidevrknwpenkpifvrvsaddymegginidmmveyinmik
dkvdlidvssggllnvdinlypgyqvkyaetikkrcniktsavglittqelaeeilsner
adlvalgrellrnpywvlhtytskedwpkqyerafkkhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3kruD (D:)
silhmplkikditiknrimmspmcmysastdgmpndwhivhyatraiggvglimqeatav
esrgritdhdlgiwndeqvkelkkivdickangavmgiqlahagrkcnisyedvvgpspi
kagdryklprelsveeiksivkafgeaakranlagydvveihaahgyliheflsplsnkr
kdeygnsienrarflievidevrknwpenkpifvrvsaddymegginidmmveyinmikd
kvdlidvssggllnvdinlypgyqvkyaetikkrcniktsavglittqelaeeilsnera
dlvalgrellrnpywvlhtytskedwpkqyerafk