PDB entry 3kpd

View 3kpd on RCSB PDB site
Description: Crystal Structure of the CBS domain pair of protein MJ0100 in complex with 5 -methylthioadenosine and S-adenosyl-L-methionine.
Class: unknown function
Keywords: CBS domain; s-adenosylmethionine; conformational change, CBS domain, UNKNOWN FUNCTION
Deposited on 2009-11-16, released 2010-01-12
The last revision prior to the SCOPe 2.08 freeze date was dated 2010-03-02, with a file datestamp of 2010-02-26.
Experiment type: XRAY
Resolution: 2.91 Å
R-factor: 0.239
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uncharacterized protein MJ0100
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: MJ0100
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kpda_
  • Chain 'B':
    Compound: Uncharacterized protein MJ0100
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: MJ0100
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kpdb_
  • Chain 'C':
    Compound: Uncharacterized protein MJ0100
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: MJ0100
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kpdc_
  • Chain 'D':
    Compound: Uncharacterized protein MJ0100
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: MJ0100
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3kpdd_
  • Heterogens: SAM, MTA

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3kpdA (A:)
tlvkdilskppitahsnisimeaakilikhninhlpivdehgklvgiitswdiakalaqn
kktieeimtrnvitahedepvdhvaikmskynisgvpvvddyrrvvgivtsedisrlfgg
kk

    Sequence, based on observed residues (ATOM records): (download) 
    >3kpdA (A:)
tlvkdilskppitahsnisimeaakilikhninhlpivdehgklvgiitswdiakalaqn
kktieeimtrnvitahedepvdhvaikmskynisgvpvvddyrrvvgivtsedisrlfg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3kpdB (B:)
tlvkdilskppitahsnisimeaakilikhninhlpivdehgklvgiitswdiakalaqn
kktieeimtrnvitahedepvdhvaikmskynisgvpvvddyrrvvgivtsedisrlfgg
kk

    Sequence, based on observed residues (ATOM records): (download) 
    >3kpdB (B:)
tlvkdilskppitahsnisimeaakilikhninhlpivdehgklvgiitswdiakalaqn
kktieeimtrnvitahedepvdhvaikmskynisgvpvvddyrrvvgivtsedisrlfgg
k

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3kpdC (C:)
tlvkdilskppitahsnisimeaakilikhninhlpivdehgklvgiitswdiakalaqn
kktieeimtrnvitahedepvdhvaikmskynisgvpvvddyrrvvgivtsedisrlfgg
kk

    Sequence, based on observed residues (ATOM records): (download) 
    >3kpdC (C:)
tlvkdilskppitahsnisimeaakilikhninhlpivdehgklvgiitswdiakalaqn
kktieeimtrnvitahedepvdhvaikmskynisgvpvvddyrrvvgivtsedisrlfg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3kpdD (D:)
tlvkdilskppitahsnisimeaakilikhninhlpivdehgklvgiitswdiakalaqn
kktieeimtrnvitahedepvdhvaikmskynisgvpvvddyrrvvgivtsedisrlfgg
kk

    Sequence, based on observed residues (ATOM records): (download) 
    >3kpdD (D:)
tlvkdilskppitahsnisimeaakilikhninhlpivdehgklvgiitswdiakalaqn
kktieeimtrnvitahedepvdhvaikmskynisgvpvvddyrrvvgivtsedisrlfg