PDB entry 3kjv

View 3kjv on RCSB PDB site
Description: HIV-1 reverse transcriptase in complex with DNA
Class: transferase/DNA
Keywords: HIV, reverse transcriptase, protein-DNA complex, TRANSFERASE-DNA complex
Deposited on 2009-11-03, released 2010-03-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2010-08-11, with a file datestamp of 2010-08-06.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.243
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Reverse transcriptase P66 SUBUNIT
    Species: Human immunodeficiency virus type 1 [TaxId:11706]
    Gene: gag-pol
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04585 (0-End)
      • engineered (257)
      • engineered (279)
    Domains in SCOPe 2.08: d3kjva1, d3kjva2
  • Chain 'B':
    Compound: Reverse transcriptase P51 SUBUNIT
    Species: Human immunodeficiency virus type 1 [TaxId:11706]
    Gene: gag-pol
    Database cross-references and differences (RAF-indexed):
    • Uniprot P04585
      • engineered (291)
    Domains in SCOPe 2.08: d3kjvb_
  • Chain 'P':
    Compound: 5'-d(*ap*cp*ap*gp*tp*cp*cp*cp*tp*gp*tp*tp*cp*gp*gp*gp*cp*gp*cp*cp*(doc))-3'
  • Chain 'T':
    Compound: 5'-d(*ap*tp*gp*gp*tp*gp*gp*gp*cp*gp*cp*cp*cp*gp*ap*ap*cp*ap*gp*gp*gp*ap*cp*tp*gp*tp*g)-3'
  • Heterogens: SO4, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3kjvA (A:)
pispietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpv
faikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpl
dedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdivi
yqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwt
vqpivlpekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeae
lelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrga
htndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntp
plvklwyqlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelq
aiylalqdsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahk
giggneqvdklvsagirkvl

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjvA (A:)
pispietvpvklkpgmdgpkvkqwkalveictemekegkiskigpenpyntpvfaikkkd
stkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtvldvgdayfsvpldedfrky
taftipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddl
yvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppflwmgyelhpdkwtvqpivlp
ekdswtvndicklvgklnwasqiypgikvrqlskllrgtkalteviplteeaelelaenr
eilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfknlktgkyarmrgahtndvkq
lteavqkittesiviwgktpkfklpiqketwetwwteywqatwipewefvntpplvklwy
qlekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqaiylalq
dsglevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpahkgiggneq
vdklvsagi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3kjvB (B:)
mgsshhhhhhsspispietvpvklkpgmdgpkvkqwplteekikalveictemekegkis
kigpenpyntpvfaikkkdstkwrklvdfrelnkrtqdfwevqlgiphpaglkkkksvtv
ldvgdayfsvpldedfrkytaftipsinnetpgiryqynvlpqgwkgspaifqssmtkil
epfrkqnpdiviyqymddlyvgsdleigqhrtkieelrqhllrwglttpdkkhqkeppfl
wmgyelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiypgikvrqlskllrgtka
lteviplteeaelelaenreilkepvhgvyydpskdliaeiqkqgqgqwtyqiyqepfkn
lktgkyarmrgahtndvkqlteavqkittesiviwgktpkfklpiqketwetwwteywqa
twipewefvntpplvklwyqlekepivgaetf

    Sequence, based on observed residues (ATOM records): (download) 
    >3kjvB (B:)
pietvpvklkpgmdgpkvkqwplteekikalveictemekegkiskigpenpyntpvfai
kkkdstkwrklvdfrelnkrtqdfphpaglkkkksvtvldvgdayfsvpldedfrkytaf
tipsinnetpgiryqynvlpqgwkgspaifqssmtkilepfrkqnpdiviyqymddlyvg
sdleigqhrtkieelrqhllrelhpdkwtvqpivlpekdswtvndiqklvgklnwasqiy
pgikvrqlskllrgtkalteviplteeaelelaenreilkepvhgvyydpskdliaeiqk
qgqgqwtyqiyqepfknlktgkyarmrgahtndvkqlteavqkittesiviwgktpkfkl
piqketwetwwteywqatwipewefvntpplvklwyqlek

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.