PDB entry 3k9s
View 3k9s on RCSB PDB site
Description: Crystal structure of the peroxide-bound manganese superoxide dismutase.
Class: Oxidoreductase
Keywords: Manganese superoxide dismutase, peroxide-bound, Manganese, Metal-binding, Oxidoreductase
Deposited on
2009-10-16, released
2010-05-12
The last revision prior to the SCOPe 2.06 freeze date was dated
2010-08-18, with a file datestamp of
2010-08-13.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: 0.229
AEROSPACI score: 0.55
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Superoxide dismutase [Mn]
Species: Escherichia coli K-12 [TaxId:83333]
Gene: b3908, JW3879, sodA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3k9sa1, d3k9sa2 - Chain 'B':
Compound: Superoxide dismutase [Mn]
Species: Escherichia coli K-12 [TaxId:83333]
Gene: b3908, JW3879, sodA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3k9sb1, d3k9sb2 - Chain 'C':
Compound: Superoxide dismutase [Mn]
Species: Escherichia coli K-12 [TaxId:83333]
Gene: b3908, JW3879, sodA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3k9sc1, d3k9sc2 - Chain 'D':
Compound: Superoxide dismutase [Mn]
Species: Escherichia coli K-12 [TaxId:83333]
Gene: b3908, JW3879, sodA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3k9sd1, d3k9sd2 - Heterogens: MN, PEO, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3k9sA (A:)
sytlpslpyaydalephfdkqtmeihhtkhhqtyvnnanaaleslpefanlpveelitkl
dqlpadkktvlrnnagghanhslfwkglkkgttlqgdlkaaierdfgsvdnfkaefekaa
asrfgsgwawlvlkgdklavvstanqdsplmgeaisgasgfpimgldvwehayylkfqnr
rpdyikefwnvvnwdeaaarfaakk
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3k9sB (B:)
sytlpslpyaydalephfdkqtmeihhtkhhqtyvnnanaaleslpefanlpveelitkl
dqlpadkktvlrnnagghanhslfwkglkkgttlqgdlkaaierdfgsvdnfkaefekaa
asrfgsgwawlvlkgdklavvstanqdsplmgeaisgasgfpimgldvwehayylkfqnr
rpdyikefwnvvnwdeaaarfaakk
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>3k9sC (C:)
sytlpslpyaydalephfdkqtmeihhtkhhqtyvnnanaaleslpefanlpveelitkl
dqlpadkktvlrnnagghanhslfwkglkkgttlqgdlkaaierdfgsvdnfkaefekaa
asrfgsgwawlvlkgdklavvstanqdsplmgeaisgasgfpimgldvwehayylkfqnr
rpdyikefwnvvnwdeaaarfaakk
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>3k9sD (D:)
sytlpslpyaydalephfdkqtmeihhtkhhqtyvnnanaaleslpefanlpveelitkl
dqlpadkktvlrnnagghanhslfwkglkkgttlqgdlkaaierdfgsvdnfkaefekaa
asrfgsgwawlvlkgdklavvstanqdsplmgeaisgasgfpimgldvwehayylkfqnr
rpdyikefwnvvnwdeaaarfaakk