PDB entry 3k8e

View 3k8e on RCSB PDB site
Description: Crystal structure of E. coli lipopolysaccharide specific CMP-KDO synthetase
Class: transferase
Keywords: KdsB synthetase deoxy kdo complex, Lipopolysaccharide biosynthesis, Magnesium, Nucleotidyltransferase, Transferase
Deposited on 2009-10-14, released 2009-11-10
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.51 Å
R-factor: 0.201
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3k8ea_
  • Chain 'B':
    Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3k8eb_
  • Chain 'C':
    Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3k8ec_
  • Chain 'D':
    Compound: 3-deoxy-manno-octulosonate cytidylyltransferase
    Species: Escherichia coli [TaxId:83333]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3k8ed_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3k8eA (A:)
hhhhhhssglvprgshmsfvviiparyastrlpgkplvdingkpmivhvleraresgaer
iivatdhedvaraveaaggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmi
patiirqvadnlaqrqvgmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdr
drfaegletvgdnflrhlgiygyragfirryvnwqpsplehiemleqlrvlwygekihva
vaqevpgtgvdtpedlervraemr

    Sequence, based on observed residues (ATOM records): (download) 
    >3k8eA (A:)
sfvviiparyastrlpgkplvdingkpmivhvleraresgaeriivatdhedvaraveaa
ggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrqv
gmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdrdrfaegvgdnflrhlgi
ygyragfirryvnwqpsplehiemleqlrvlwygekihvavaqevpgtgvdtpedlervr
ae

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3k8eB (B:)
hhhhhhssglvprgshmsfvviiparyastrlpgkplvdingkpmivhvleraresgaer
iivatdhedvaraveaaggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmi
patiirqvadnlaqrqvgmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdr
drfaegletvgdnflrhlgiygyragfirryvnwqpsplehiemleqlrvlwygekihva
vaqevpgtgvdtpedlervraemr

    Sequence, based on observed residues (ATOM records): (download) 
    >3k8eB (B:)
sfvviiparyastrlpgkplvdingkpmivhvleraresgaeriivatdhedvaraveaa
ggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrqv
gmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdrdrfaegletvgdnflrh
lgiygyragfirryvnwqpsplehiemleqlrvlwygekihvavaqevpgtgvdtpedle
rvraem

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3k8eC (C:)
hhhhhhssglvprgshmsfvviiparyastrlpgkplvdingkpmivhvleraresgaer
iivatdhedvaraveaaggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmi
patiirqvadnlaqrqvgmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdr
drfaegletvgdnflrhlgiygyragfirryvnwqpsplehiemleqlrvlwygekihva
vaqevpgtgvdtpedlervraemr

    Sequence, based on observed residues (ATOM records): (download) 
    >3k8eC (C:)
sfvviiparyastrlpgkplvdingkpmivhvleraresgaeriivatdhedvaraveaa
ggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrqv
gmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdrdrfaegletvgdnflrh
lgiygyragfirryvnwqpsplehiemleqlrvlwygekihvavaqevpgtgvdtpedle
rvra

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3k8eD (D:)
hhhhhhssglvprgshmsfvviiparyastrlpgkplvdingkpmivhvleraresgaer
iivatdhedvaraveaaggevcmtradhqsgterlaevvekcafsddtvivnvqgdepmi
patiirqvadnlaqrqvgmatlavpihnaeeafnpnavkvvldaegyalyfsratipwdr
drfaegletvgdnflrhlgiygyragfirryvnwqpsplehiemleqlrvlwygekihva
vaqevpgtgvdtpedlervraemr

    Sequence, based on observed residues (ATOM records): (download) 
    >3k8eD (D:)
fvviiparyastrlpgkplvdingkpmivhvleraresgaeriivatdhedvaraveaag
gevcmtrsgterlaevvekcafsddtvivnvqgdepmipatiirqvadnlaqrqvgmatl
avpihnaeeafnpnavkvvldaegyalyfsratipwdrdrfaegvgdnflrhlgiygyra
gfirryvnwqpsplehiemleqlrvlwygekihvavaqevpgtgvdtpedlervraem