PDB entry 3k4g

View 3k4g on RCSB PDB site
Description: Crystal structure of E. coli RNA polymerase alpha subunit C-terminal domain
Class: transferase
Keywords: BACTERIAL TRANSCRIPTION REGULATION, DNA-directed RNA polymerase, Nucleotidyltransferase, Transcription, Transferase
Deposited on 2009-10-05, released 2010-07-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-09-07, with a file datestamp of 2011-09-02.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.194
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA-directed RNA polymerase subunit alpha
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b3295, JW3257, pez, phs, rpoA, sez
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3k4ga_
  • Chain 'B':
    Compound: DNA-directed RNA polymerase subunit alpha
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b3295, JW3257, pez, phs, rpoA, sez
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3k4gb_
  • Chain 'C':
    Compound: DNA-directed RNA polymerase subunit alpha
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b3295, JW3257, pez, phs, rpoA, sez
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3k4gc_
  • Chain 'D':
    Compound: DNA-directed RNA polymerase subunit alpha
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b3295, JW3257, pez, phs, rpoA, sez
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3k4gd_
  • Chain 'E':
    Compound: DNA-directed RNA polymerase subunit alpha
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b3295, JW3257, pez, phs, rpoA, sez
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3k4ge_
  • Chain 'F':
    Compound: DNA-directed RNA polymerase subunit alpha
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b3295, JW3257, pez, phs, rpoA, sez
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3k4gf_
  • Chain 'G':
    Compound: DNA-directed RNA polymerase subunit alpha
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b3295, JW3257, pez, phs, rpoA, sez
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3k4gg_
  • Chain 'H':
    Compound: DNA-directed RNA polymerase subunit alpha
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b3295, JW3257, pez, phs, rpoA, sez
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3k4gh_
  • Heterogens: NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3k4gA (A:)
    mekpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkksltei
    kdvlasrglslgmrlenwppasiade
    

    Sequence, based on observed residues (ATOM records): (download)
    >3k4gA (A:)
    kpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkkslteikd
    vlasrglslgmrlenwppasiade
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3k4gB (B:)
    mekpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkksltei
    kdvlasrglslgmrlenwppasiade
    

    Sequence, based on observed residues (ATOM records): (download)
    >3k4gB (B:)
    kpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkkslteikd
    vlasrglslgmrlenwppasiad
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3k4gC (C:)
    mekpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkksltei
    kdvlasrglslgmrlenwppasiade
    

    Sequence, based on observed residues (ATOM records): (download)
    >3k4gC (C:)
    kpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkkslteikd
    vlasrglslgmrlenwppasiade
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3k4gD (D:)
    mekpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkksltei
    kdvlasrglslgmrlenwppasiade
    

    Sequence, based on observed residues (ATOM records): (download)
    >3k4gD (D:)
    kpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkkslteikd
    vlasrglslgmrlenwppasiad
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >3k4gE (E:)
    mekpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkksltei
    kdvlasrglslgmrlenwppasiade
    

    Sequence, based on observed residues (ATOM records): (download)
    >3k4gE (E:)
    kpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkkslteikd
    vlasrglslgmrlenwppasiad
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >3k4gF (F:)
    mekpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkksltei
    kdvlasrglslgmrlenwppasiade
    

    Sequence, based on observed residues (ATOM records): (download)
    >3k4gF (F:)
    kpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkkslteikd
    vlasrglslgmrlenwppasiade
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >3k4gG (G:)
    mekpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkksltei
    kdvlasrglslgmrlenwppasiade
    

    Sequence, based on observed residues (ATOM records): (download)
    >3k4gG (G:)
    kpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkkslteikd
    vlasrglslgmrlenwppasiade
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >3k4gH (H:)
    mekpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkksltei
    kdvlasrglslgmrlenwppasiade
    

    Sequence, based on observed residues (ATOM records): (download)
    >3k4gH (H:)
    kpefdpillrpvddleltvrsanclkaeaihyigdlvqrtevellktpnlgkkslteikd
    vlasrglslgmrlenwppasiad