PDB entry 3k28

View 3k28 on RCSB PDB site
Description: Crystal Structure of a glutamate-1-semialdehyde aminotransferase from Bacillus anthracis with bound Pyridoxal 5'Phosphate
Class: isomerase, transferase
Keywords: Biosynthesis of cofactors, prosthetic groups, and carriers, CSGID, Cytoplasm, Isomerase, Porphyrin biosynthesis, Pyridoxal phosphate, Structural Genomics, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Department of Health and Human Services, Center for Structural Genomics of Infectious Diseases
Deposited on 2009-09-29, released 2010-01-19
The last revision prior to the SCOPe 2.07 freeze date was dated 2010-01-19, with a file datestamp of 2010-01-15.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.147
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Glutamate-1-semialdehyde 2,1-aminomutase 2
    Species: Bacillus anthracis str. 'Ames Ancestor' [TaxId:261594]
    Gene: BAS4358, BA_4693, GBAA_4693, hemL-2, hemL2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3k28a_
  • Chain 'B':
    Compound: Glutamate-1-semialdehyde 2,1-aminomutase 2
    Species: Bacillus anthracis str. 'Ames Ancestor' [TaxId:261594]
    Gene: BAS4358, BA_4693, GBAA_4693, hemL-2, hemL2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3k28b_
  • Chain 'C':
    Compound: Glutamate-1-semialdehyde 2,1-aminomutase 2
    Species: Bacillus anthracis str. 'Ames Ancestor' [TaxId:261594]
    Gene: BAS4358, BA_4693, GBAA_4693, hemL-2, hemL2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3k28c_
  • Chain 'D':
    Compound: Glutamate-1-semialdehyde 2,1-aminomutase 2
    Species: Bacillus anthracis str. 'Ames Ancestor' [TaxId:261594]
    Gene: BAS4358, BA_4693, GBAA_4693, hemL-2, hemL2
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3k28d_
  • Heterogens: PLP, CA, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3k28A (A:)
mrkfdksiaafeeaqdlmpggvnspvrafksvgmnplfmergkgskvydidgneyidyvl
swgplihghandrvvealkavaergtsfgapteienklaklviervpsieivrmvnsgte
atmsalrlargytgrnkilkfigcyhghgdsllikagsgvatlglpdspgvpegvaknti
tvayndlesvkyafeqfgddiacvivepvagnmgvvppqpgfleglrevteqngallifd
evmtgfrvayncgqgyygvtpdltclgkviggglpvgayggkaeimrqvapsgpiyqagt
lsgnplamaagyetlvqltpesyveferkaemleaglrkaaekhgiphhinragsmigif
ftdepvinydaakssnlqffaayyremveqgvflppsqfeglflstvhsdadieatiaaa
eiamsklka

    Sequence, based on observed residues (ATOM records): (download) 
    >3k28A (A:)
mrkfdksiaafeeaqdlmpggvnspvrafksvgmnplfmergkgskvydidgneyidyvl
swgplihghandrvvealkavaergtsfgapteienklaklviervpsieivrmvnsgte
atmsalrlargytgrnkilkfigcyhghgdsllikagsgvpdspgvpegvakntitvayn
dlesvkyafeqfgddiacvivepvagnmgvvppqpgfleglrevteqngallifdevmtg
frvayncgqgyygvtpdltclgkviggglpvgayggkaeimrqvapsgpiyqagtlsgnp
lamaagyetlvqltpesyveferkaemleaglrkaaekhgiphhinragsmigifftdep
vinydaakssnlqffaayyremveqgvflppsqfeglflstvhsdadieatiaaaeiams
klk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3k28B (B:)
mrkfdksiaafeeaqdlmpggvnspvrafksvgmnplfmergkgskvydidgneyidyvl
swgplihghandrvvealkavaergtsfgapteienklaklviervpsieivrmvnsgte
atmsalrlargytgrnkilkfigcyhghgdsllikagsgvatlglpdspgvpegvaknti
tvayndlesvkyafeqfgddiacvivepvagnmgvvppqpgfleglrevteqngallifd
evmtgfrvayncgqgyygvtpdltclgkviggglpvgayggkaeimrqvapsgpiyqagt
lsgnplamaagyetlvqltpesyveferkaemleaglrkaaekhgiphhinragsmigif
ftdepvinydaakssnlqffaayyremveqgvflppsqfeglflstvhsdadieatiaaa
eiamsklka

    Sequence, based on observed residues (ATOM records): (download) 
    >3k28B (B:)
mrkfdksiaafeeaqdlmpggvnspvrafksvgmnplfmergkgskvydidgneyidyvl
swgplihghandrvvealkavaergtsfgapteienklaklviervpsieivrmvnsgte
atmsalrlargytgrnkilkfigcyhghgdsllikagsgvdspgvpegvakntitvaynd
lesvkyafeqfgddiacvivepvagnmgvvppqpgfleglrevteqngallifdevmtgf
rvayncgqgyygvtpdltclgkviggglpvgayggkaeimrqvapsgpiyqagtlsgnpl
amaagyetlvqltpesyveferkaemleaglrkaaekhgiphhinragsmigifftdepv
inydaakssnlqffaayyremveqgvflppsqfeglflstvhsdadieatiaaaeiamsk
lk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3k28C (C:)
mrkfdksiaafeeaqdlmpggvnspvrafksvgmnplfmergkgskvydidgneyidyvl
swgplihghandrvvealkavaergtsfgapteienklaklviervpsieivrmvnsgte
atmsalrlargytgrnkilkfigcyhghgdsllikagsgvatlglpdspgvpegvaknti
tvayndlesvkyafeqfgddiacvivepvagnmgvvppqpgfleglrevteqngallifd
evmtgfrvayncgqgyygvtpdltclgkviggglpvgayggkaeimrqvapsgpiyqagt
lsgnplamaagyetlvqltpesyveferkaemleaglrkaaekhgiphhinragsmigif
ftdepvinydaakssnlqffaayyremveqgvflppsqfeglflstvhsdadieatiaaa
eiamsklka

    Sequence, based on observed residues (ATOM records): (download) 
    >3k28C (C:)
mrkfdksiaafeeaqdlmpggvnspvrafksvgmnplfmergkgskvydidgneyidyvl
swgplihghandrvvealkavaergtsfgapteienklaklviervpsieivrmvnsgte
atmsalrlargytgrnkilkfigcyhghgdsllikagsgvdspgvpegvakntitvaynd
lesvkyafeqfgddiacvivepvagnmgvvppqpgfleglrevteqngallifdevmtgf
rvayncgqgyygvtpdltclgkviggglpvgayggkaeimrqvapsgpiyqagtlsgnpl
amaagyetlvqltpesyveferkaemleaglrkaaekhgiphhinragsmigifftdepv
inydaakssnlqffaayyremveqgvflppsqfeglflstvhsdadieatiaaaeiamsk
lk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3k28D (D:)
mrkfdksiaafeeaqdlmpggvnspvrafksvgmnplfmergkgskvydidgneyidyvl
swgplihghandrvvealkavaergtsfgapteienklaklviervpsieivrmvnsgte
atmsalrlargytgrnkilkfigcyhghgdsllikagsgvatlglpdspgvpegvaknti
tvayndlesvkyafeqfgddiacvivepvagnmgvvppqpgfleglrevteqngallifd
evmtgfrvayncgqgyygvtpdltclgkviggglpvgayggkaeimrqvapsgpiyqagt
lsgnplamaagyetlvqltpesyveferkaemleaglrkaaekhgiphhinragsmigif
ftdepvinydaakssnlqffaayyremveqgvflppsqfeglflstvhsdadieatiaaa
eiamsklka

    Sequence, based on observed residues (ATOM records): (download) 
    >3k28D (D:)
mrkfdksiaafeeaqdlmpggvnspvrafksvgmnplfmergkgskvydidgneyidyvl
swgplihghandrvvealkavaergtsfgapteienklaklviervpsieivrmvnsgte
atmsalrlargytgrnkilkfigcyhghgdsllikalpdspgvpegvakntitvayndle
svkyafeqfgddiacvivepvagnmgvvppqpgfleglrevteqngallifdevmtgfrv
ayncgqgyygvtpdltclgkviggglpvgayggkaeimrqvapsgpiyqagtlsgnplam
aagyetlvqltpesyveferkaemleaglrkaaekhgiphhinragsmigifftdepvin
ydaakssnlqffaayyremveqgvflppsqfeglflstvhsdadieatiaaaeiamsklk