PDB entry 3ju5

View 3ju5 on RCSB PDB site
Description: Crystal Structure of Dimeric Arginine Kinase at 1.75-A Resolution
Class: transferase
Keywords: arginine kinase, reciprocating mechanism, negative cooperativity, phosphagen kinase, ATP-binding, Kinase, Nucleotide-binding, Transferase
Deposited on 2009-09-14, released 2009-09-29
The last revision prior to the SCOPe 2.08 freeze date was dated 2010-01-19, with a file datestamp of 2010-01-15.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: 0.173
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: arginine kinase
    Species: Apostichopus japonicus [TaxId:307972]
    Gene: AK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ju5a1, d3ju5a2
  • Chain 'B':
    Compound: arginine kinase
    Species: Apostichopus japonicus [TaxId:307972]
    Gene: AK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ju5b1, d3ju5b2
  • Chain 'C':
    Compound: arginine kinase
    Species: Apostichopus japonicus [TaxId:307972]
    Gene: AK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ju5c1, d3ju5c2
  • Chain 'D':
    Compound: arginine kinase
    Species: Apostichopus japonicus [TaxId:307972]
    Gene: AK
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3ju5d1, d3ju5d2
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ju5A (A:)
manlnqkkypakddfpnfeghksllskyltadmyaklrdvatpsgytldraiqngvdnpd
fhlgllagdeetytvfadlfdpvieeyhngfkktdnhktdldaskilddvldpayvissr
vrtgrnirgmalsphvcrserraiekmvsealnslaadlkgkyyslmkmdektqqqlidd
hflfdrpvsrhftsggmardfpdgrgiwhndkknflvwineedhtriismqmggnmkevf
erftrgltevekhikdktgkefmkndhlgfvltcpsnlgtgvrcsvhaklphmakdkrfe
eictkmrlqkrgtsgeftesvggvydisnldrlgsseveqvncvikgvkvliemekklek
gesiddlvpk

    Sequence, based on observed residues (ATOM records): (download) 
    >3ju5A (A:)
anlnqkkypakddfpnfeghksllskyltadmyaklrdvatpsgytldraiqngvdnpdf
hlgllagdeetytvfadlfdpvieeyhngfkktdnhktdldaskilddvldpayvissrv
rtgrnirgmalsphvcrserraiekmvsealnslaadlkgkyyslmkmdektqqqliddh
flfdrpvsrhftsggmardfpdgrgiwhndkknflvwineedhtriismqmggnmkevfe
rftrgltevekhikdktgkefmkndhlgfvltcpsnlgtgvrcsvhaklphmakdkrfee
ictkmrlqkrgtsvggvydisnldrlgsseveqvncvikgvkvliemekklekgesiddl
vpk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ju5B (B:)
manlnqkkypakddfpnfeghksllskyltadmyaklrdvatpsgytldraiqngvdnpd
fhlgllagdeetytvfadlfdpvieeyhngfkktdnhktdldaskilddvldpayvissr
vrtgrnirgmalsphvcrserraiekmvsealnslaadlkgkyyslmkmdektqqqlidd
hflfdrpvsrhftsggmardfpdgrgiwhndkknflvwineedhtriismqmggnmkevf
erftrgltevekhikdktgkefmkndhlgfvltcpsnlgtgvrcsvhaklphmakdkrfe
eictkmrlqkrgtsgeftesvggvydisnldrlgsseveqvncvikgvkvliemekklek
gesiddlvpk

    Sequence, based on observed residues (ATOM records): (download) 
    >3ju5B (B:)
anlnqkkypakddfpnfeghksllskyltadmyaklrdvatpsgytldraiqngvdnpdf
hlgllagdeetytvfadlfdpvieeyhngfkktdnhktdldaskilddvldpayvissrv
rtgrnirgmalsphvcrserraiekmvsealnslaadlkgkyyslmkmdektqqqliddh
flfdrpvsrhftsggmardfpdgrgiwhndkknflvwineedhtriismqmggnmkevfe
rftrgltevekhikdktgkefmkndhlgfvltcpsnlgtgvrcsvhaklphmakdkrfee
ictkmrlqkrgtsgsvggvydisnldrlgsseveqvncvikgvkvliemekklekgesid
dlvpk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3ju5C (C:)
manlnqkkypakddfpnfeghksllskyltadmyaklrdvatpsgytldraiqngvdnpd
fhlgllagdeetytvfadlfdpvieeyhngfkktdnhktdldaskilddvldpayvissr
vrtgrnirgmalsphvcrserraiekmvsealnslaadlkgkyyslmkmdektqqqlidd
hflfdrpvsrhftsggmardfpdgrgiwhndkknflvwineedhtriismqmggnmkevf
erftrgltevekhikdktgkefmkndhlgfvltcpsnlgtgvrcsvhaklphmakdkrfe
eictkmrlqkrgtsgeftesvggvydisnldrlgsseveqvncvikgvkvliemekklek
gesiddlvpk

    Sequence, based on observed residues (ATOM records): (download) 
    >3ju5C (C:)
anlnqkkypakddfpnfeghksllskyltadmyaklrdvatpsgytldraiqngvdnpdf
hlgllagdeetytvfadlfdpvieeyhngfkktdnhktdldaskilddvldpayvissrv
rtgrnirgmalsphvcrserraiekmvsealnslaadlkgkyyslmkmdektqqqliddh
flfdrpvsrhftsggmardfpdgrgiwhndkknflvwineedhtriismqmggnmkevfe
rftrgltevekhikdktgkefmkndhlgfvltcpsnlgtgvrcsvhaklphmakdkrfee
ictkmrlqkrgtsgtesvggvydisnldrlgsseveqvncvikgvkvliemekklekges
iddlvpk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3ju5D (D:)
manlnqkkypakddfpnfeghksllskyltadmyaklrdvatpsgytldraiqngvdnpd
fhlgllagdeetytvfadlfdpvieeyhngfkktdnhktdldaskilddvldpayvissr
vrtgrnirgmalsphvcrserraiekmvsealnslaadlkgkyyslmkmdektqqqlidd
hflfdrpvsrhftsggmardfpdgrgiwhndkknflvwineedhtriismqmggnmkevf
erftrgltevekhikdktgkefmkndhlgfvltcpsnlgtgvrcsvhaklphmakdkrfe
eictkmrlqkrgtsgeftesvggvydisnldrlgsseveqvncvikgvkvliemekklek
gesiddlvpk

    Sequence, based on observed residues (ATOM records): (download) 
    >3ju5D (D:)
anlnqkkypakddfpnfeghksllskyltadmyaklrdvatpsgytldraiqngvdnpdf
hlgllagdeetytvfadlfdpvieeyhngfkktdnhktdldaskilddvldpayvissrv
rtgrnirgmalsphvcrserraiekmvsealnslaadlkgkyyslmkmdektqqqliddh
flfdrpvsrhftsggmardfpdgrgiwhndkknflvwineedhtriismqmggnmkevfe
rftrgltevekhikdktgkefmkndhlgfvltcpsnlgtgvrcsvhaklphmakdkrfee
ictkmrlqkrgggvydisnldrlgsseveqvncvikgvkvliemekklekgesiddlvpk