PDB entry 3jrb

View 3jrb on RCSB PDB site
Description: Crystal structure of Fis bound to 27 bp DNA F24 containing T-tract at center
Class: DNA binding protein/DNA
Keywords: Protein-DNA complex, HTH domain, minor groove compression, DNA bending, indirect recognition, activator, DNA-binding, Transcription, Transcription regulation, DNA BINDING PROTEIN-DNA COMPLEX
Deposited on 2009-09-08, released 2010-04-28
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA-binding protein fis
    Species: Escherichia coli [TaxId:83333]
    Gene: fis, b3261, JW3229
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3jrba_
  • Chain 'B':
    Compound: DNA-binding protein fis
    Species: Escherichia coli [TaxId:83333]
    Gene: fis, b3261, JW3229
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d3jrbb_
  • Chain 'C':
    Compound: DNA (27-mer)
    Species:
    Gene:
  • Chain 'D':
    Compound: DNA (27-mer)
    Species:
    Gene:
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3jrbA (A:)
    mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveq
    plldmvmqytrgnqtraalmmginrgtlrkklkkygmn
    

    Sequence, based on observed residues (ATOM records): (download)
    >3jrbA (A:)
    sdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveqplldmvm
    qytrgnqtraalmmginrgtlrkklkkygmn
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3jrbB (B:)
    mfeqrvnsdvltvstvnsqdqvtqkplrdsvkqalknyfaqlngqdvndlyelvlaeveq
    plldmvmqytrgnqtraalmmginrgtlrkklkkygmn
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.