PDB entry 3imq

View 3imq on RCSB PDB site
Description: Crystal structure of the NusB101-S10(delta loop) complex
Class: transcription regulator / ribosomal protein
Keywords: Processive transcription antitermination; transcription termination; transcription factor; protein-protein interaction; protein-RNA interaction, RNA-binding, Transcription, Transcription regulation, Transcription termination, Ribonucleoprotein, Ribosomal protein, transcription regulator - ribosomal protein COMPLEX
Deposited on 2009-08-11, released 2009-11-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.207
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: N utilization substance protein B
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b0416, JW0406, nusB, ssyB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A780 (4-140)
      • engineered (119)
    Domains in SCOPe 2.08: d3imqa_
  • Chain 'B':
    Compound: N utilization substance protein B
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b0416, JW0406, nusB, ssyB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A780 (4-140)
      • engineered (119)
    Domains in SCOPe 2.08: d3imqb_
  • Chain 'C':
    Compound: N utilization substance protein B
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b0416, JW0406, nusB, ssyB
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A780 (4-140)
      • engineered (119)
    Domains in SCOPe 2.08: d3imqc_
  • Chain 'J':
    Compound: 30S ribosomal protein S10
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b3321, JW3283, nusE, rpsJ
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A7R5 (5-86)
      • expression tag (0-4)
  • Chain 'K':
    Compound: 30S ribosomal protein S10
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b3321, JW3283, nusE, rpsJ
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A7R5 (5-86)
      • expression tag (0-4)
  • Chain 'L':
    Compound: 30S ribosomal protein S10
    Species: Escherichia coli K-12 [TaxId:83333]
    Gene: b3321, JW3283, nusE, rpsJ
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A7R5 (5-86)
      • expression tag (0-4)
  • Heterogens: K, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3imqA (A:)
    gamepaarrrarecavqalyswqlsqndiadveyqflaeqdvkdvdvlyfrellagvatn
    tayldglmkpylsrlleelgqvekavlrialyelskrsdvpykvaineaielaksfgaen
    shkfvngvldkaapvirpnkk
    

    Sequence, based on observed residues (ATOM records): (download)
    >3imqA (A:)
    paarrrarecavqalyswqlsqndiadveyqflaeqdvkdvdvlyfrellagvatntayl
    dglmkpylsrlleelgqvekavlrialyelskrsdvpykvaineaielaksfgaenshkf
    vngvldkaapvirpnkk
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3imqB (B:)
    gamepaarrrarecavqalyswqlsqndiadveyqflaeqdvkdvdvlyfrellagvatn
    tayldglmkpylsrlleelgqvekavlrialyelskrsdvpykvaineaielaksfgaen
    shkfvngvldkaapvirpnkk
    

    Sequence, based on observed residues (ATOM records): (download)
    >3imqB (B:)
    paarrrarecavqalyswqlsqndiadveyqflaeqdvkdvdvlyfrellagvatntayl
    dglmkpylsrlleelgqvekavlrialyelskrsdvpykvaineaielaksfgaenshkf
    vngvldkaapvirpnkk
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3imqC (C:)
    gamepaarrrarecavqalyswqlsqndiadveyqflaeqdvkdvdvlyfrellagvatn
    tayldglmkpylsrlleelgqvekavlrialyelskrsdvpykvaineaielaksfgaen
    shkfvngvldkaapvirpnkk
    

    Sequence, based on observed residues (ATOM records): (download)
    >3imqC (C:)
    paarrrarecavqalyswqlsqndiadveyqflaeqdvkdvdvlyfrellagvatntayl
    dglmkpylsrlleelgqvekavlrialyelskrsdvpykvaineaielaksfgaenshkf
    vngvldkaapvirpnkk
    

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    No sequence available.

  • Chain 'L':
    No sequence available.