PDB entry 3i6v

View 3i6v on RCSB PDB site
Description: Crystal structure of a periplasmic His/Glu/Gln/Arg/opine family-binding protein from Silicibacter pomeroyi in complex with lysine
Class: transport protein
Keywords: STRUCTURAL GENOMICS, TRANSPORTER, PSI-2, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, TRANSPORT PROTEIN
Deposited on 2009-07-07, released 2009-07-21
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.2
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: periplasmic His/Glu/Gln/Arg/opine family-binding protein
    Species: Silicibacter pomeroyi [TaxId:89184]
    Gene: SPO1306
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3i6va_
  • Heterogens: LYS, NA, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3i6vA (A:)
msladtvrmgtegayppynfindagevdgferelgdelckragltcewvkndwdsiipnl
vsgnydtiiagmsitderdevidftqnyipptassyvatsdgadlsgivaaqtatiqagy
iaesgatlvefatpeetiaavrngeadavfadrdylvpivaesggelmfvgddvplgggv
gmglresdgelrgkfdaaitsmkedgtlntmikkwfgedaavyeeghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3i6vA (A:)
tvrmgtegayppynfindagevdgferelgdelckragltcewvkndwdsiipnlvsgny
dtiiagmsitderdevidftqnyipptassyvatsdgadlsgivaaqtatiqagyiaesg
atlvefatpeetiaavrngeadavfadrdylvpivaesggelmfvgddvplgggvgmglr
esdgelrgkfdaaitsmkedgtlntmikkwfgedaavy