PDB entry 3htx

View 3htx on RCSB PDB site
Description: crystal structure of small rna methyltransferase hen1
Deposited on 2009-06-12, released 2009-09-29
The last revision was dated 2021-10-13, with a file datestamp of 2021-10-08.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.26
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hen1
    Species: ARABIDOPSIS THALIANA [TaxId:3702]
    Gene: HEN1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q945R3 (8-949)
      • expression tag (0-7)
      • engineered mutation (611)
      • engineered mutation (647)
  • Chain 'B':
    Compound: 5'-r(*gp*ap*up*up*up*cp*up*cp*up*cp*up*gp*cp*ap*ap*gp*cp*gp*ap*ap*ap*g)-3'
  • Chain 'C':
    Compound: 5'-r(p*up*up*cp*gp*cp*up*up*gp*cp*ap*gp*ap*gp*ap*gp*ap*ap*ap*up*cp*ap*c)-3'
  • Chain 'D':
    Compound: hen1
    Species: ARABIDOPSIS THALIANA [TaxId:3702]
    Gene: HEN1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q945R3 (8-949)
      • expression tag (0-7)
      • engineered mutation (611)
      • engineered mutation (647)
  • Chain 'E':
    Compound: 5'-r(*gp*ap*up*up*up*cp*up*cp*up*cp*up*gp*cp*ap*ap*gp*cp*gp*ap*ap*ap*g)-3'
  • Chain 'F':
    Compound: 5'-r(p*up*up*cp*gp*cp*up*up*gp*cp*ap*gp*ap*gp*ap*gp*ap*ap*ap*up*cp*ap*c)-3'
  • Heterogens: MG, SAH, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3htxA (A:)
mghhhhhhmagggkhtptpkaiihqkfgakasytveevhdssqsgcpglaipqkgpclyr
chlqlpefsvvsnvfkkkkdseqsaaelaldklgirpqnddltvdeardeivgrikyifs
deflsaehplgahlraalrrdgercgsvpvsviatvdakinsrckiinpsvesdpflais
yvmkaaakladyivasphglrrknaypseivealathvsdslhsrevaavyipcideevv
eldtlyissnrhyldsiaerlglkdgnqvmisrmfgkascgsecrlyseipkkyldnssd
asgtsnedsshivksrnarasyicgqdihgdailasvgyrwksddldyddvtvnsfyric
cgmspngiykisrqaviaaqlpfafttksnwrgplpreilglfchqhrlaepilssstap
vkslsdifrshkklkvsgvddanenlsrqkedtpglghgfrcevkiftksqdlvlecspr
kfyekendaiqnaslkallwfskffadldvdgeqscdtdddqdtkssspnvfaappilqk
ehsseskntnvlsaekrvqsitngsvvsicyslslavdpeyssdgesprednesneemes
eysancessvepiesneeiefevgtgsmnphiesevtqmtvgeyasfkmtppdaaealil
avgsdtvrirsllserpclnynilllgvkgpseermeaaffkpplskqrveyalkhires
sastlvdfgcgsgslldslldyptslqtiigvdispkglaraakmlhvklnkeacnvksa
tlydgsilefdsrlhdvdigtcleviehmeedqacefgekvlslfhpkllivstpnyefn
tilqrstpetqeennsepqlpkfrnhdhkfewtreqfnqwasklgkrhnysvefsgvggs
gevepgfasqiaifrreassvenvaessmqpykviwewkkedvekkktdl

    Sequence, based on observed residues (ATOM records):
    >3htxA (A:)
htptpkaiihqkfgakasytveevhdssqsgcpglaipqkgpclyrchlqlpefsvvsnv
fkkkkdseqsaaelaldklgirpqnddltvdeardeivgrikyifsdeflsaehplgahl
raalrrdgercgsvpvsviatvdakinsrckiinpsvesdpflaisyvmkaaakladyiv
asphglrrknaypseivealathvsdsrevaavyipcideevveldtlyissnrhyldsi
aerlglkdgnqvmisrmfgkascgsecrlyseipkkyldnshivksrnarasyicgqdih
gdailasvgyrwksddldyddvtvnsfyriccgmspngiykisrqaviaaqlpfafttks
nwrgplpreilglfchqhrlaepilssstevkiftksqdlvlecsprkfyekendaiqna
slkallwfskffadlsseskntsitngsvvsicyslslavdpssvepiesneeiefevgt
gsmnphiesevtqmtvgeyasfkmtppdaaealilavgsdtvrirsllserpclnynill
lgvkgpseermeaaffkpplskqrveyalkhiressastlvdfgcgsgslldslldypts
lqtiigvdispkglaraakmlhvklnkeacnvksatlydgsilefdsrlhdvdigtclev
iehmeedqacefgekvlslfhpkllivstpnyefntilqrsqlpkfrnhdhkfewtreqf
nqwasklgkrhnysvefsgvggsgevepgfasqiaifrreasaessmqpykviwewkke

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3htxD (D:)
mghhhhhhmagggkhtptpkaiihqkfgakasytveevhdssqsgcpglaipqkgpclyr
chlqlpefsvvsnvfkkkkdseqsaaelaldklgirpqnddltvdeardeivgrikyifs
deflsaehplgahlraalrrdgercgsvpvsviatvdakinsrckiinpsvesdpflais
yvmkaaakladyivasphglrrknaypseivealathvsdslhsrevaavyipcideevv
eldtlyissnrhyldsiaerlglkdgnqvmisrmfgkascgsecrlyseipkkyldnssd
asgtsnedsshivksrnarasyicgqdihgdailasvgyrwksddldyddvtvnsfyric
cgmspngiykisrqaviaaqlpfafttksnwrgplpreilglfchqhrlaepilssstap
vkslsdifrshkklkvsgvddanenlsrqkedtpglghgfrcevkiftksqdlvlecspr
kfyekendaiqnaslkallwfskffadldvdgeqscdtdddqdtkssspnvfaappilqk
ehsseskntnvlsaekrvqsitngsvvsicyslslavdpeyssdgesprednesneemes
eysancessvepiesneeiefevgtgsmnphiesevtqmtvgeyasfkmtppdaaealil
avgsdtvrirsllserpclnynilllgvkgpseermeaaffkpplskqrveyalkhires
sastlvdfgcgsgslldslldyptslqtiigvdispkglaraakmlhvklnkeacnvksa
tlydgsilefdsrlhdvdigtcleviehmeedqacefgekvlslfhpkllivstpnyefn
tilqrstpetqeennsepqlpkfrnhdhkfewtreqfnqwasklgkrhnysvefsgvggs
gevepgfasqiaifrreassvenvaessmqpykviwewkkedvekkktdl

    Sequence, based on observed residues (ATOM records):
    >3htxD (D:)
htptpkaiihqkfgakasytveevhdssqsgcpglaipqkgpclyrchlqlpefsvvsnv
fkkkkdseqsaaelaldklgirpqnddltvdeardeivgrikyifsdeflsaehplgahl
raalrrdgercgsvpvsviatvdakinsrckiinpsvesdpflaisyvmkaaakladyiv
asphglrrknaypseivealathvsdslhsrevaavyipcideevveldtlyissnrhyl
dsiaerlglkdgnqvmisrmfgkascgsecrlyseipkkyldnssivksrnarasyicgq
dihgdailasvgyrwksddldyddvtvnsfyriccgmspngiykisrqaviaaqlpfaft
tksnwrgplpreilglfchqhrlaepilsssrcevkiftksqdlvlecsprkfyekenda
iqnaslkallwfskffadlspnvfaappsseskekrvqsitngsvvsicyslslavdpey
essvepiesneeiefevgtgsmnphiesevtqmtvgeyasfkmtppdaaealilavgsdt
vrirsllserpclnynilllgvkgpseermeaaffkpplskqrveyalkhiressastlv
dfgcgsgslldslldyptslqtiigvdispkglaraakmlhvklnkeacnvksatlydgs
ilefdsrlhdvdigtcleviehmeedqacefgekvlslfhpkllivstpnyefntilqrs
tlpkfrnhdhkfewtreqfnqwasklgkrhnysvefsgvggsgevepgfasqiaifrree
ssmqpykviwewkke

  • Chain 'E':
    No sequence available.

  • Chain 'F':
    No sequence available.