PDB entry 3hr2

View 3hr2 on RCSB PDB site
Description: Low resolution, molecular envelope structure of type I collagen in situ determined by fiber diffraction. Single type I collagen molecule, post rigid body refinement, 'relaxed'
Deposited on 2009-06-08, released 2009-07-14
The last revision was dated 2009-07-14, with a file datestamp of 2009-07-10.
Experiment type: FIBER
Resolution: 5.16 Å
R-factor: N/A
AEROSPACI score: -0.01 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Collagen alpha-1(I) chain
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Collagen alpha-2(I) chain
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Collagen alpha-1(I) chain
    Species: Rattus norvegicus [TaxId:10116]
    Database cross-references and differences (RAF-indexed):

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3hr2A (A:)
qmsygydeksagvsvpgpmgpsgprglpgppgapgpqgfqgppgepgepggsgpmgppgp
pgppgkngddgeagkpgrpgergppgpqgarglpgtaglpgmkghrgfsgldgakgdtgp
agpkgepgspgengtpgqmgprglpgergrpgppgtagargndgavgaagppgptgptgp
pgfpgaagakgeagpqgargsegpqgvrgepgppgpagaagpagnpgadgqpgakganga
pgiagapgfpgargpsgpqgpsgapgpkgtsgepgapgnkgdtgakgepgpagvqgppgp
ageegkrgargepgpsglpgppgerggpgsrgfpgadgvagpkgpsgergspgpagpkgs
pgeagrpgeaglpgakgltgspgspgpdgktgppgpagqdgrpgpagppgargqagvmgf
pgpkgtagepgkagergvpgppgavgpagkdgeagaqgapgpagpagergeqgpagspgf
qglpgpagppgeagkpgeqgvpgdlgapgpsgargergfpgergvqgppgpagprgnnga
pgndgakgdtgapgapgsqgapglqgmpgergaaglpgpkgdrgdagpkgadgspgkdgv
rgltgpigppgpagapgdkgeagpsgpagptgargapgdrgeagppgpagfagppgadgq
pgakgepgdtgvkgdagppgpagpagppgpignvgapgpkgsrgaagppgatgfpgaagr
vgppgpsgnagppgppgpvgkeggkgprgetgpagrpgevgppgppgpagekgspgadgp
agspgtpgpqgiagqrgvvglpgqrgkrgfpglpgpsgepgkqgpsgasgergppgpmgp
pglagppgesgregspgaegspgrdgapgakgdrgetgpagppgapgapgapgpvgpagk
ngdrgetgpagpagpigpagargpagpqgprgdkgetgeqgdrgikghrgfsglqgppgs
pgspgeqgpsgasgpagprgppgsagspgkdglnglpgpigppgprgrtgdsgpagppgp
pgppgppgppsggydfsflpqppqeksqdggryyra

    Sequence, based on observed residues (ATOM records):
    >3hr2A (A:)
qmsygydeksagvsvpgpmgpsgprglpgppgapgpqgfqgppgepgepggsgpmgppgp
pgppgkngddgeagkpgrpgergppgpqgarglpgtaglpgmkghrgfsgldgakgdtgp
agpkgepgspgengtpgqmgprglpgergrpgppgtagargndgavgaagppgptgptgp
pgfpgaagakgeagpqgargsegpqgvrgepgppgpagaagpagnpgadgqpgakganga
pgiagapgfpgargpsgpqgpsgapgpkgtsgepgapgnkgdtgakgepgpagvqgppgp
ageegkrgargepgpsglpgppgerggpgsrgfpgadgvagpkgpsgergspgpagpkgs
pgeagrpgeaglpgakgltgspgspgpdgktgppgpagqdgrpgpagppgargqagvmgf
pgpkgtagepgkagergvpgppgavgpagkdgeagaqgapgpagpagergeqgpagspgf
qglpgpagppgeagkpgeqgvpgdlgapgpsgargergfpgergvqgppgpagprgnnga
pgndgakgdtgapgapgsqgapglqgmpgergaaglpgpkgdrgdagpkgadgspgkdgv
rgltgpigppgpagapgdkgeagpsgpagptgargapgdrgeagppgpagfagppgadgq
pgakgepgdtgvkgdagppgpagpagppgpignvgapgpkgsrgaagppgatgfpgaagr
vgppgpsgnagppgppgpvgkeggkgprgetgpagrpgevgppgppgpagekgspgadgp
agspgtpgpqgiagqrgvvglpgqrgkrgfpglpgpsgepgkqgpsgasgergppgpmgp
pglagppgesgregspgaegspgrdgapgakgdrgetgpagppgapgapgapgpvgpagk
ngdrgetgpagpagpigpagargpagpqgprgdkgetgeqgdrgikghrgfsglqgppgs
pgspgeqgpsgasgpagprgppgsagspgkdglnglpgpigppgprgrtgdsgpagppgp
pgppgppgppsggydfsflpqppqeksqdggryy

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3hr2B (B:)
qysdkgvsagpgpmglmgprgppgavgapgpqgfqgpagepgepgqtgpagsrgpagppg
kagedghpgkpgrpgergvvgpqgargfpgtpglpgfkgirghngldglkgqpgaqgvkg
epgapgengtpgqagarglpgergrvgapgpagargsdgsvgpvgpagpigsagppgfpg
apgpkgelgpvgnpgpagpagprgeaglpglsgpvgppgnpgangltgakgatglpgvag
apglpgprgipgpvgaagatgprglvgepgpagskgetgnkgepgsagaqgppgpsgeeg
krgspgepgsagpagppglrgspgsrglpgadgragvmgppgnrgstgpagvrgpngdag
rpgepglmgprglpgspgnvgpagkegpvglpgidgrpgpigpagprgeagnigfpgpkg
psgdpgkpgekghpglagargapgpdgnngaqgppgpqgvqggkgeqgpagppgfqglpg
psgtagevgkpgerglpgefglpgpagprgergppgesgaagpsgpigirgpsgapgpdg
nkgeagavgapgsagasgpgglpgergaagipggkgekgetglrgeignpgrdgargapg
aigapgpagasgdrgeagaagpsgpagprgspgergevgpagpngfagpagsagqpgakg
ekgtkgpkgengivgptgpvgaagpsgpngppgpagsrgdggppgmtgfpgaagrtgppg
psgitgppgppgaagkegirgprgdqgpvgrtgeigasgppgfagekgpsgepgttgppg
tagpqgllgapgilglpgsrgergqpgiagalgepgplgiagppgargppgavgspgvng
apgeagrdgnpgsdgppgrdgqpghkgergypgnigptgaagapgphgsvgpagkhgnrg
epgpagsvgpvgavgprgpsgpqgirgdkgepgdkgarglpglkghnglqglpglaglhg
dqgapgpvgpagprgpagpsgpigkdgrsghpgpvgpagvrgsqgsqgpagppgppgppg
ppgvsggg

    Sequence, based on observed residues (ATOM records):
    >3hr2B (B:)
sdkgvsagpgpmglmgprgppgavgapgpqgfqgpagepgepgqtgpagsrgpagppgka
gedghpgkpgrpgergvvgpqgargfpgtpglpgfkgirghngldglkgqpgaqgvkgep
gapgengtpgqagarglpgergrvgapgpagargsdgsvgpvgpagpigsagppgfpgap
gpkgelgpvgnpgpagpagprgeaglpglsgpvgppgnpgangltgakgatglpgvagap
glpgprgipgpvgaagatgprglvgepgpagskgetgnkgepgsagaqgppgpsgeegkr
gspgepgsagpagppglrgspgsrglpgadgragvmgppgnrgstgpagvrgpngdagrp
gepglmgprglpgspgnvgpagkegpvglpgidgrpgpigpagprgeagnigfpgpkgps
gdpgkpgekghpglagargapgpdgnngaqgppgpqgvqggkgeqgpagppgfqglpgps
gtagevgkpgerglpgefglpgpagprgergppgesgaagpsgpigirgpsgapgpdgnk
geagavgapgsagasgpgglpgergaagipggkgekgetglrgeignpgrdgargapgai
gapgpagasgdrgeagaagpsgpagprgspgergevgpagpngfagpagsagqpgakgek
gtkgpkgengivgptgpvgaagpsgpngppgpagsrgdggppgmtgfpgaagrtgppgps
gitgppgppgaagkegirgprgdqgpvgrtgeigasgppgfagekgpsgepgttgppgta
gpqgllgapgilglpgsrgergqpgiagalgepgplgiagppgargppgavgspgvngap
geagrdgnpgsdgppgrdgqpghkgergypgnigptgaagapgphgsvgpagkhgnrgep
gpagsvgpvgavgprgpsgpqgirgdkgepgdkgarglpglkghnglqglpglaglhgdq
gapgpvgpagprgpagpsgpigkdgrsghpgpvgpagvrgsqgsqgpagppgppgppgpp
gvsggg

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3hr2C (C:)
qmsygydeksagvsvpgpmgpsgprglpgppgapgpqgfqgppgepgepggsgpmgppgp
pgppgkngddgeagkpgrpgergppgpqgarglpgtaglpgmkghrgfsgldgakgdtgp
agpkgepgspgengtpgqmgprglpgergrpgppgtagargndgavgaagppgptgptgp
pgfpgaagakgeagpqgargsegpqgvrgepgppgpagaagpagnpgadgqpgakganga
pgiagapgfpgargpsgpqgpsgapgpkgtsgepgapgnkgdtgakgepgpagvqgppgp
ageegkrgargepgpsglpgppgerggpgsrgfpgadgvagpkgpsgergspgpagpkgs
pgeagrpgeaglpgakgltgspgspgpdgktgppgpagqdgrpgpagppgargqagvmgf
pgpkgtagepgkagergvpgppgavgpagkdgeagaqgapgpagpagergeqgpagspgf
qglpgpagppgeagkpgeqgvpgdlgapgpsgargergfpgergvqgppgpagprgnnga
pgndgakgdtgapgapgsqgapglqgmpgergaaglpgpkgdrgdagpkgadgspgkdgv
rgltgpigppgpagapgdkgeagpsgpagptgargapgdrgeagppgpagfagppgadgq
pgakgepgdtgvkgdagppgpagpagppgpignvgapgpkgsrgaagppgatgfpgaagr
vgppgpsgnagppgppgpvgkeggkgprgetgpagrpgevgppgppgpagekgspgadgp
agspgtpgpqgiagqrgvvglpgqrgkrgfpglpgpsgepgkqgpsgasgergppgpmgp
pglagppgesgregspgaegspgrdgapgakgdrgetgpagppgapgapgapgpvgpagk
ngdrgetgpagpagpigpagargpagpqgprgdkgetgeqgdrgikghrgfsglqgppgs
pgspgeqgpsgasgpagprgppgsagspgkdglnglpgpigppgprgrtgdsgpagppgp
pgppgppgppsggydfsflpqppqeksqdggryyra

    Sequence, based on observed residues (ATOM records):
    >3hr2C (C:)
qmsygydeksagvsvpgpmgpsgprglpgppgapgpqgfqgppgepgepggsgpmgppgp
pgppgkngddgeagkpgrpgergppgpqgarglpgtaglpgmkghrgfsgldgakgdtgp
agpkgepgspgengtpgqmgprglpgergrpgppgtagargndgavgaagppgptgptgp
pgfpgaagakgeagpqgargsegpqgvrgepgppgpagaagpagnpgadgqpgakganga
pgiagapgfpgargpsgpqgpsgapgpkgtsgepgapgnkgdtgakgepgpagvqgppgp
ageegkrgargepgpsglpgppgerggpgsrgfpgadgvagpkgpsgergspgpagpkgs
pgeagrpgeaglpgakgltgspgspgpdgktgppgpagqdgrpgpagppgargqagvmgf
pgpkgtagepgkagergvpgppgavgpagkdgeagaqgapgpagpagergeqgpagspgf
qglpgpagppgeagkpgeqgvpgdlgapgpsgargergfpgergvqgppgpagprgnnga
pgndgakgdtgapgapgsqgapglqgmpgergaaglpgpkgdrgdagpkgadgspgkdgv
rgltgpigppgpagapgdkgeagpsgpagptgargapgdrgeagppgpagfagppgadgq
pgakgepgdtgvkgdagppgpagpagppgpignvgapgpkgsrgaagppgatgfpgaagr
vgppgpsgnagppgppgpvgkeggkgprgetgpagrpgevgppgppgpagekgspgadgp
agspgtpgpqgiagqrgvvglpgqrgkrgfpglpgpsgepgkqgpsgasgergppgpmgp
pglagppgesgregspgaegspgrdgapgakgdrgetgpagppgapgapgapgpvgpagk
ngdrgetgpagpagpigpagargpagpqgprgdkgetgeqgdrgikghrgfsglqgppgs
pgspgeqgpsgasgpagprgppgsagspgkdglnglpgpigppgprgrtgdsgpagppgp
pgppgppgppsggydfsflpqppqeksqdggryy