PDB entry 3hqk

View 3hqk on RCSB PDB site
Description: X-ray crystal structure of an arginine agmatine antiporter (AdiC) in complex with a Fab fragment
Deposited on 2009-06-07, released 2009-07-07
The last revision was dated 2010-08-18, with a file datestamp of 2010-08-13.
Experiment type: XRAY
Resolution: 3.2 Å
R-factor: 0.297
AEROSPACI score: 0.09 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Arginine/agmatine antiporter
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: adiC, aniC, P60066, STM4294
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Arginine/agmatine antiporter
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: adiC, aniC, P60066, STM4294
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Arginine/agmatine antiporter
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: adiC, aniC, P60066, STM4294
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Arginine/agmatine antiporter
    Species: Salmonella enterica subsp. enterica serovar Typhimurium [TaxId:90371]
    Gene: adiC, aniC, P60066, STM4294
    Database cross-references and differences (RAF-indexed):
  • Chain 'P':
    Compound: Fab-light-chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3HQK (0-218)
  • Chain 'Q':
    Compound: Fab-light-chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3HQK (0-End)
  • Chain 'S':
    Compound: Fab-heavy-chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3HQK (0-210)
  • Chain 'W':
    Compound: Fab-heavy-chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 3HQK (0-210)

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3hqkA (A:)
mssdadahkvglipvtlmvsgnimgsgvfllpanlaatggiaiygwlvtiigalalsmvy
akmssldpspggsyayarrcfgpflgyqtnvlywlacwigniamvvigvgylsyffpilk
dplvltltcvavlwifvllnivgpkmitrvqavatvlalvpivgiavfgwfwfkgetyma
awnvsgmntfgaiqstlnvtlwsfigvesasvaagvvknpkrnvpiatiggvliaavcyv
lsttaimgmipnaalrvsaspfgdaarmalgdtagaivsfcaaagclgslggwtllagqt
akaaaddglfppifarvnkagtpvagllivgvlmtifqfssmspnaakefglvssvsvif
tlvpylytcaallllghghfgkarplyllitfvafvyciwavigsgakevmwsfvtlmvi
talyalnynrihknpypldapvkqd

    Sequence, based on observed residues (ATOM records):
    >3hqkA (A:)
vglipvtlmvsgnimgsgvfllpanlaatggiaiygwlvtiigalalsmvyakmssldps
pggsyayarrcfgpflgyqtnvlywlacwigniamvvigvgylsyffpilkdplvltltc
vavlwifvllnivgpkmitrvqavatvlalvpivgiavfgwfwfkgegmntfgaiqstln
vtlwsfigvesasvaagvvknpkrnvpiatiggvliaavcyvlsttaimgmipnaalrvs
aspfgdaarmalgdtagaivsfcaaagclgslggwtllagqtakaaaddglfppifartp
vagllivgvlmtifqfssmspnaakefglvssvsviftlvpylytcaallllghghfgka
rplyllitfvafvyciwavigsgakevmwsfvtlmvitalyalnynrihknpypldap

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3hqkB (B:)
mssdadahkvglipvtlmvsgnimgsgvfllpanlaatggiaiygwlvtiigalalsmvy
akmssldpspggsyayarrcfgpflgyqtnvlywlacwigniamvvigvgylsyffpilk
dplvltltcvavlwifvllnivgpkmitrvqavatvlalvpivgiavfgwfwfkgetyma
awnvsgmntfgaiqstlnvtlwsfigvesasvaagvvknpkrnvpiatiggvliaavcyv
lsttaimgmipnaalrvsaspfgdaarmalgdtagaivsfcaaagclgslggwtllagqt
akaaaddglfppifarvnkagtpvagllivgvlmtifqfssmspnaakefglvssvsvif
tlvpylytcaallllghghfgkarplyllitfvafvyciwavigsgakevmwsfvtlmvi
talyalnynrihknpypldapvkqd

    Sequence, based on observed residues (ATOM records):
    >3hqkB (B:)
vglipvtlmvsgnimgsgvfllpanlaatggiaiygwlvtiigalalsmvyakmssldps
pggsyayarrcfgpflgyqtnvlywlacwigniamvvigvgylsyffpilkdplvltltc
vavlwifvllnivgpkmitrvqavatvlalvpivgiavfgwfwfkwnvsgmntfgaiqst
lnvtlwsfigvesasvaagvvknpkrnvpiatiggvliaavcyvlsttaimgmipnaalr
vsaspfgdaarmalgdtagaivsfcaaagclgslggwtllagqtakaaaddglfppifar
vnkaggllivgvlmtifqfssmspnaakefglvssvsviftlvpylytcaallllghghf
gkarplyllitfvafvyciwavigsgakevmwsfvtlmvitalyalnynrihknpyplda

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3hqkC (C:)
mssdadahkvglipvtlmvsgnimgsgvfllpanlaatggiaiygwlvtiigalalsmvy
akmssldpspggsyayarrcfgpflgyqtnvlywlacwigniamvvigvgylsyffpilk
dplvltltcvavlwifvllnivgpkmitrvqavatvlalvpivgiavfgwfwfkgetyma
awnvsgmntfgaiqstlnvtlwsfigvesasvaagvvknpkrnvpiatiggvliaavcyv
lsttaimgmipnaalrvsaspfgdaarmalgdtagaivsfcaaagclgslggwtllagqt
akaaaddglfppifarvnkagtpvagllivgvlmtifqfssmspnaakefglvssvsvif
tlvpylytcaallllghghfgkarplyllitfvafvyciwavigsgakevmwsfvtlmvi
talyalnynrihknpypldapvkqd

    Sequence, based on observed residues (ATOM records):
    >3hqkC (C:)
glipvtlmvsgnimgsgvfllpanlaatggiaiygwlvtiigalalsmvyakmssldpsp
ggsyayarrcfgpflgyqtnvlywlacwigniamvvigvgylsyffpilkdplvltltcv
avlwifvllnivgpkmitrvqavatvlalvpivgiavfgwfwfkwnvsgmntfgaiqstl
nvtlwsfigvesasvaagvvknpkrnvpiatiggvliaavcyvlsttaimgmipnaalrv
saspfgdaarmalgdtagaivsfcaaagclgslggwtllagqtakaaaddglfppifarg
tpvagllivgvlmtifqfssmspnaakefglvssvsviftlvpylytcaallllghghfg
karplyllitfvafvyciwavigsgakevmwsfvtlmvitalyalnynrihknpypldap

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3hqkD (D:)
mssdadahkvglipvtlmvsgnimgsgvfllpanlaatggiaiygwlvtiigalalsmvy
akmssldpspggsyayarrcfgpflgyqtnvlywlacwigniamvvigvgylsyffpilk
dplvltltcvavlwifvllnivgpkmitrvqavatvlalvpivgiavfgwfwfkgetyma
awnvsgmntfgaiqstlnvtlwsfigvesasvaagvvknpkrnvpiatiggvliaavcyv
lsttaimgmipnaalrvsaspfgdaarmalgdtagaivsfcaaagclgslggwtllagqt
akaaaddglfppifarvnkagtpvagllivgvlmtifqfssmspnaakefglvssvsvif
tlvpylytcaallllghghfgkarplyllitfvafvyciwavigsgakevmwsfvtlmvi
talyalnynrihknpypldapvkqd

    Sequence, based on observed residues (ATOM records):
    >3hqkD (D:)
vglipvtlmvsgnimgsgvfllpanlaatggiaiygwlvtiigalalsmvyakmssldps
pggsyayarrcfgpflgyqtnvlywlacwigniamvvigvgylsyffpilkdplvltltc
vavlwifvllnivgpkmitrvqavatvlalvpivgiavfgwfwfkwnvsgmntfgaiqst
lnvtlwsfigvesasvaagvvknpkrnvpiatiggvliaavcyvlsttaimgmipnaalr
vsaspfgdaarmalgdtagaivsfcaaagclgslggwtllagqtakaaaddglfppifar
gtpvagllivgvlmtifqfssmspnaakefglvssvsviftlvpylytcaallllghghf
gkarplyllitfvafvyciwavigsgakevmwsfvtlmvitalyalnynrihknpypld

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records:
    >3hqkP (P:)
qvqlqqsgpelvkpgalvkisckasgytftnydinwvkqrpgqglewigwiypgdgstmy
nekfkgkatltadkssstaymqlssltsenssvyfcarldgnyggwfaywgqgtsvtvss
akttppsvyplapvcgdttgssvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsd
lytlsssvtvpsstwpsetvtcnvahpasstkvdkkivp

  • Chain 'Q':
    Sequence, based on SEQRES records:
    >3hqkQ (Q:)
qvqlqqsgpelvkpgalvkisckasgytftnydinwvkqrpgqglewigwiypgdgstmy
nekfkgkatltadkssstaymqlssltsenssvyfcarldgnyggwfaywgqgtsvtvss
akttppsvyplapvcgdttgssvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsd
lytlsssvtvpsstwpsetvtcnvahpasstkvdkkivp

    Sequence, based on observed residues (ATOM records):
    >3hqkQ (Q:)
qvqlqqsgpelvkpgalvkisckasgytftnydinwvkqrpgqglewigwiypgdgstmy
nekfkgkatltadkssstaymqlssltsenssvyfcarldgnyggwfaywgqgtsvtvss
akttppsvyplapvcgdttgssvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsd
lytlsssvtvpsstwpsetvtcnvahpasstkvdkkiv

  • Chain 'S':
    Sequence; same for both SEQRES and ATOM records:
    >3hqkS (S:)
elvmtqspaimsaspgekvtmtcsasssvnymhwyqqksgtspkrwiydtsklasgvpar
fsgsgsgtsysltissmeaedaatyycqqwsynpptfgggtkleikradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnr

  • Chain 'W':
    Sequence; same for both SEQRES and ATOM records:
    >3hqkW (W:)
elvmtqspaimsaspgekvtmtcsasssvnymhwyqqksgtspkrwiydtsklasgvpar
fsgsgsgtsysltissmeaedaatyycqqwsynpptfgggtkleikradaaptvsifpps
seqltsggasvvcflnnfypkdinvkwkkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnr