PDB entry 3ho7

View 3ho7 on RCSB PDB site
Description: Crystal structure of OxyR from Porphyromonas gingivalis
Class: transcription
Keywords: beta-alpha-barrels, DNA-binding, Transcription, Transcription regulation
Deposited on 2009-06-01, released 2010-06-09
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-01-08, with a file datestamp of 2014-01-03.
Experiment type: XRAY
Resolution: 1.58 Å
R-factor: 0.22
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: OxyR
    Species: Porphyromonas gingivalis [TaxId:837]
    Gene: oxyR, PG_0270
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7MXD3 (Start-227)
      • expression tag (228)
    Domains in SCOPe 2.08: d3ho7a1, d3ho7a2
  • Chain 'B':
    Compound: OxyR
    Species: Porphyromonas gingivalis [TaxId:837]
    Gene: oxyR, PG_0270
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7MXD3 (Start-227)
      • expression tag (228)
    Domains in SCOPe 2.08: d3ho7b1, d3ho7b2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3ho7A (A:)
iieeeqqsltgrlniavlptiapyllprvfpiwkkelagleihvsemqtsrclasllsge
idmaiiaskaetegleddllyyeeflgyvsrceplfeqdvirttevnphrlwlldeghcf
rdqlvrfcqmkglherqtaysggsmeafmrlvesgqgitfipqltveqlspsqkelvrpf
gmprpvrevrlavrqdysrrklreqligllrsavpsdmhklqtgqhlahhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3ho7A (A:)
tgrlniavlptiapyllprvfpiwkkelagleihvsemqtsrclasllsgeidmaiiask
aetegleddllyyeeflgyvsrceplfeqdvirttevnphrlwlldeghcfrdqlvrfcq
mkglherqtaysggsmeafmrlvesgqgitfipqltveqlspsqkelvrpfgmprpvrev
rlavrqdysrrklreqligllrsavpsdmhklqtgqhlah

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3ho7B (B:)
iieeeqqsltgrlniavlptiapyllprvfpiwkkelagleihvsemqtsrclasllsge
idmaiiaskaetegleddllyyeeflgyvsrceplfeqdvirttevnphrlwlldeghcf
rdqlvrfcqmkglherqtaysggsmeafmrlvesgqgitfipqltveqlspsqkelvrpf
gmprpvrevrlavrqdysrrklreqligllrsavpsdmhklqtgqhlahhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3ho7B (B:)
tgrlniavlptiapyllprvfpiwkkelagleihvsemqtsrclasllsgeidmaiiask
aetegleddllyyeeflgyvsrceplfeqdvirttevnphrlwlldeghcfrdqlvrfcq
mkglherqtaysggsmeafmrlvesgqgitfipqltveqlspsqkelvrpfgmprpvrev
rlavrqdysrrklreqligllrsavpsdmhklqtgqhlah