PDB entry 3hm6

View 3hm6 on RCSB PDB site
Description: crystal structure of the cytoplasmic domain of human plexin b1
Deposited on 2009-05-28, released 2009-06-09
The last revision was dated 2021-10-13, with a file datestamp of 2021-10-08.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'C':
    Compound: Unknown peptide
    Species: Homo sapiens [TaxId:9606]
    Gene: PLXNB1, KIAA0407, PLXN5, SEP
    Database cross-references and differences (RAF-indexed):
    • PDB 3HM6 (0-26)
  • Chain 'X':
    Compound: Plexin-B1
    Species: Homo sapiens [TaxId:9606]
    Gene: PLXNB1, KIAA0407, PLXN5, SEP
    Database cross-references and differences (RAF-indexed):
    • Uniprot O43157 (19-643)
      • initiating methionine (0)
      • expression tag (1-18)
      • engineered mutation (133)
  • Heterogens: UNX, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >3hm6C (C:)
    xxxxxxxxxxxxxxxxxxxxxxxxxxx
    

  • Chain 'X':
    Sequence, based on SEQRES records:
    >3hm6X (X:)
    mgsshhhhhhssglvprgsyrrkskqalrdykkvqiqlenlessvrdrckkeftdlmtem
    tdltsdllgsgipfldykvyaeriffpghresplhrdlgvpesrrptveqglgqlsnlln
    sklfltkfihtletqrtfsardrayvaslltvalhgkleyftdilrtllsdlvaqyvakn
    pklmlrrtetvveklltnwmsiclytfvrdsvgeplymlfrgikhqvdkgpvdsvtgkak
    ytlndnrllredveyrpltlnallavgpgageaqgvpvkvldcdtisqakekmldqlykg
    vpltqrpdprtldvewrsgvaghlilsdedvtsevqglwrrlntlqhykvpdgatvalvp
    cltkhvlrenqdyvpgertpmledvdeggirpwhlvkpsdepepprprrgslrggerera
    kaipeiyltrllsmkgtlqkfvddlfqvilstsrpvplavkyffdlldeqaqqhgisdqd
    tihiwktnslplrfwiniiknpqfvfdvqtsdnmdavllviaqtfmdactladhklgrds
    pinkllyardiprykrmveryyadirqtvpasdqemnsvlaelswnysgdlgarvalhel
    ykyinkyydqiitaleedgtaqkmqlgyrlqqiaaavenkvtdl
    

    Sequence, based on observed residues (ATOM records):
    >3hm6X (X:)
    ipfldykvyaeriffpghsplhrdlgvpesrrptveqglgqlsnllnsklfltkfihtle
    tqrtfsardrayvaslltvalhgkleyftdilrtllsdlvaqyvaknpklmlrrtetvve
    klltnwmsiclytfvrdsvgeplymlfrgikhqvdkgpvdsvtgkakytlndnrllredv
    eyrpltlnallaaqgvpvkvldcdtisqakekmldqlykgvpltqrpdprtldvewrsgv
    aghlilsdedvtsevqglwrrlntlqhykvpdgatvalvpcggirpwhlvkpsipeiylt
    rllsmkgtlqkfvddlfqvilstsrpvplavkyffdlldeqaqqhgisdqdtihiwktns
    lplrfwiniiknpqfvfdvqtsdnmdavllviaqtfmdactladspinkllyardipryk
    rmveryyadirqtvpasdqemnsvlaelswnysgdlgarvalhelykyinkyydqiital
    eedgtaqkmqlgyrlqqiaaave