PDB entry 3hm2

View 3hm2 on RCSB PDB site
Description: Crystal Structure of Putative Precorrin-6Y C5,15-Methyltransferase Targeted Domain from Corynebacterium diphtheriae
Deposited on 2009-05-28, released 2009-07-07
The last revision was dated 2009-07-07, with a file datestamp of 2009-07-02.
Experiment type: XRAY
Resolution: 2.21 Å
R-factor: 0.213
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: precorrin-6Y C5,15-methyltransferase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Gene: DIP1236
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: precorrin-6Y C5,15-methyltransferase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Gene: DIP1236
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: precorrin-6Y C5,15-methyltransferase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Gene: DIP1236
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: precorrin-6Y C5,15-methyltransferase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Gene: DIP1236
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: precorrin-6Y C5,15-methyltransferase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Gene: DIP1236
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: precorrin-6Y C5,15-methyltransferase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Gene: DIP1236
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: precorrin-6Y C5,15-methyltransferase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Gene: DIP1236
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: precorrin-6Y C5,15-methyltransferase
    Species: Corynebacterium diphtheriae [TaxId:1717]
    Gene: DIP1236
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ACY, MG, CA, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3hm2A (A:)
snatdgqltkqhvralaisalapkphetlwdigggsgsiaiewlrstpqttavcfeisee
rrerilsnainlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvg
grlvanavtveseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

    Sequence, based on observed residues (ATOM records):
    >3hm2A (A:)
gqltkqhvralaisalapkphetlwdigggsgsiaiewlrstpqttavcfeiseerreri
lsnainlgvsdriavqqgaprafddvpdnpdvifiggltapgvfaaawkrlpvggrlvan
avtveseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvk

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3hm2B (B:)
snatdgqltkqhvralaisalapkphetlwdigggsgsiaiewlrstpqttavcfeisee
rrerilsnainlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvg
grlvanavtveseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

    Sequence, based on observed residues (ATOM records):
    >3hm2B (B:)
gqltkqhvralaisalapkphetlwdigggsgsiaiewlrstpqttavcfeiseerreri
lsnainlgvsdriavqqgaprafddvpdnpdvifigltapgvfaaawkrlpvggrlvana
vtveseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3hm2C (C:)
snatdgqltkqhvralaisalapkphetlwdigggsgsiaiewlrstpqttavcfeisee
rrerilsnainlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvg
grlvanavtveseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

    Sequence, based on observed residues (ATOM records):
    >3hm2C (C:)
gqltkqhvralaisalapkphetlwdigsiaiewlrstpqttavcfeiseerrerilsna
inlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvggrlvanavt
veseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3hm2D (D:)
snatdgqltkqhvralaisalapkphetlwdigggsgsiaiewlrstpqttavcfeisee
rrerilsnainlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvg
grlvanavtveseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

    Sequence, based on observed residues (ATOM records):
    >3hm2D (D:)
gqltkqhvralaisalapkphetlwdisgsiaiewlrsqttavcfeiseerrerilsnai
nlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvggrlvanavtv
eseqmlwalrkqfggtissfaishehtgsfitmkpalpvhqwtvvka

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3hm2E (E:)
snatdgqltkqhvralaisalapkphetlwdigggsgsiaiewlrstpqttavcfeisee
rrerilsnainlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvg
grlvanavtveseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

    Sequence, based on observed residues (ATOM records):
    >3hm2E (E:)
gqltkqhvralaisalapkphetlwdiggsiaiewlrstpqttavcfeiseerrerilsn
ainlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvggrlvanav
tveseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3hm2F (F:)
snatdgqltkqhvralaisalapkphetlwdigggsgsiaiewlrstpqttavcfeisee
rrerilsnainlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvg
grlvanavtveseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

    Sequence, based on observed residues (ATOM records):
    >3hm2F (F:)
gqltkqhvralaisalapkphetlwdiggsiaiewlrstpqttavcfeiseerrerilsn
ainlgvsdriavqqgaprafddvpdnpdvifiltapgvfaaawkrlpvggrlvanavtve
seqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

  • Chain 'G':
    Sequence, based on SEQRES records:
    >3hm2G (G:)
snatdgqltkqhvralaisalapkphetlwdigggsgsiaiewlrstpqttavcfeisee
rrerilsnainlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvg
grlvanavtveseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

    Sequence, based on observed residues (ATOM records):
    >3hm2G (G:)
gqltkqhvralaisalapketlwdigggsgsiaiewlrstpqttavcfeiseerrerils
nainlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvggrlvana
vtveseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

  • Chain 'H':
    Sequence, based on SEQRES records:
    >3hm2H (H:)
snatdgqltkqhvralaisalapkphetlwdigggsgsiaiewlrstpqttavcfeisee
rrerilsnainlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvg
grlvanavtveseqmlwalrkqfggtissfaishehtvgsfitmkpalpvhqwtvvka

    Sequence, based on observed residues (ATOM records):
    >3hm2H (H:)
gqltkqhvralaisalapketlwdigggsiaiewlrstpqttavcfeiseerrerilsna
inlgvsdriavqqgaprafddvpdnpdvifigggltapgvfaaawkrlpvggrlvanavt
veseqmlwalrkqfggtissfaishehgsfitmkpalpvhqwtvvka