PDB entry 3hkm

View 3hkm on RCSB PDB site
Description: Crystal Structure of rice(Oryza sativa) Rrp46
Deposited on 2009-05-25, released 2010-01-26
The last revision was dated 2010-12-08, with a file datestamp of 2010-12-03.
Experiment type: XRAY
Resolution: 1.98 Å
R-factor: 0.173
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Os03g0854200 protein
    Species: Oryza sativa Japonica Group [TaxId:39947]
    Gene: putative exonuclease RRP46
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Os03g0854200 protein
    Species: Oryza sativa Japonica Group [TaxId:39947]
    Gene: putative exonuclease RRP46
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: Os03g0854200 protein
    Species: Oryza sativa Japonica Group [TaxId:39947]
    Gene: putative exonuclease RRP46
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3hkmA (A:)
meesradgrnpnqlrpfsctrnpldrahgsarwaqgdtivlaavygpkpgtrkgenpeka
sievvwkpmtgqigkqekeyemtlkrtlqsiclltvhpntttsvilqvvgndgsllpcai
naccaalvfagiplkhlavaigcgvledgevildtnkaeeqqlksfahlvfpnsrksass
kepnqkeedserglitsithgvmseedyfscierglaassrisdfmrttlqkqapgdvle
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >3hkmA (A:)
radgrnpnqlrpfsctrnpldrahgsarwaqgdtivlaavygpkpgtrkgenpekasiev
vwkpmtgqigkqekeyemtlkrtlqsiclltvhpntttsvilqvvgndgsllpcainacc
aalvfagiplkhlavaigcgvledgevildtnkaeeqqlksfahlvfpnlitsithgvms
eedyfscierglaassrisdfmrttlq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3hkmB (B:)
meesradgrnpnqlrpfsctrnpldrahgsarwaqgdtivlaavygpkpgtrkgenpeka
sievvwkpmtgqigkqekeyemtlkrtlqsiclltvhpntttsvilqvvgndgsllpcai
naccaalvfagiplkhlavaigcgvledgevildtnkaeeqqlksfahlvfpnsrksass
kepnqkeedserglitsithgvmseedyfscierglaassrisdfmrttlqkqapgdvle
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >3hkmB (B:)
radgrnpnqlrpfsctrnpldrahgsarwaqgdtivlaavygpkpgtrkgenpekasiev
vwkpmtgqigkqekeyemtlkrtlqsiclltvhpntttsvilqvvgndgsllpcainacc
aalvfagiplkhlavaigcgvledgevildtnkaeeqqlksfahlvfpnsrkrglitsit
hgvmseedyfscierglaassrisdfmrttlqk

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3hkmC (C:)
meesradgrnpnqlrpfsctrnpldrahgsarwaqgdtivlaavygpkpgtrkgenpeka
sievvwkpmtgqigkqekeyemtlkrtlqsiclltvhpntttsvilqvvgndgsllpcai
naccaalvfagiplkhlavaigcgvledgevildtnkaeeqqlksfahlvfpnsrksass
kepnqkeedserglitsithgvmseedyfscierglaassrisdfmrttlqkqapgdvle
hhhhhh

    Sequence, based on observed residues (ATOM records):
    >3hkmC (C:)
radgrnpnqlrpfsctrnplrahgsarwaqgdtivlaavygpkpgtrkasievvwkpmtg
qigkqekeyemtlkrtlqsiclltvhpntttsvilqvvgndgsllpcainaccaalvfag
iplkhlavaigcgvvildtnkaeeqqlksfahlvfplitsithgmseedyfscierglaa
ssrisdfmrttlqkq