PDB entry 3hjn
View 3hjn on RCSB PDB site
Description: Crystal structure of thymidylate kinase in complex with dTDP and ADP from Thermotoga maritima
Class: transferase
Keywords: thymidylate kinase, ATP-binding, Kinase, Nucleotide biosynthesis, Nucleotide-binding, Transferase, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI
Deposited on
2009-05-22, released
2009-06-02
The last revision prior to the SCOPe 2.05 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.226
AEROSPACI score: 0.38
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: thymidylate kinase
Species: THERMOTOGA MARITIMA [TaxId:243274]
Gene: tmk, TM_1099
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3hjna_ - Chain 'B':
Compound: thymidylate kinase
Species: THERMOTOGA MARITIMA [TaxId:243274]
Gene: tmk, TM_1099
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3hjnb_ - Heterogens: ADP, TYD, MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3hjnA (A:)
mfitfegidgsgkstqiqllaqylekrgkkvilkrepggtetgekirkilleeevtpkae
lflflasrnllvteikqylsegyavlldrytdssvayqgfgrnlgkeiveelndfatdgl
ipdltfyidvdvetalkrkgelnrfekreflervregylvlarehperivvldgkrsiee
ihrdvvrevkrrwkldv
Sequence, based on observed residues (ATOM records): (download)
>3hjnA (A:)
mfitfegidgsgkstqiqllaqylekrgkkvilkrepggtetgekirkilleeevtpkae
lflflasrnllvteikqylsegyavlldrytdssvayqgfgrnlgkeiveelndfatdgl
ipdltfyidvdvetalkrknrfekreflervregylvlarehperivvldgkrsieeihr
dvvrevkrr
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3hjnB (B:)
mfitfegidgsgkstqiqllaqylekrgkkvilkrepggtetgekirkilleeevtpkae
lflflasrnllvteikqylsegyavlldrytdssvayqgfgrnlgkeiveelndfatdgl
ipdltfyidvdvetalkrkgelnrfekreflervregylvlarehperivvldgkrsiee
ihrdvvrevkrrwkldv
Sequence, based on observed residues (ATOM records): (download)
>3hjnB (B:)
mfitfegidgsgkstqiqllaqylekrgkkvilkrepggtetgekirkilleeevtpkae
lflflasrnllvteikqylsegyavlldrytdssvayqgfgrnlgkeiveelndfatdgl
ipdltfyidvdvetalkrnrfekreflervregylvlarehperivvldgkrsieeihrd
vvre