PDB entry 3h9y
View 3h9y on RCSB PDB site
Description: Crystal structure of the IgE-Fc3-4 domains
Class: immune system
Keywords: Immunoglobin, IgE, Fc, flexibility, hydrophobic pocket, Disulfide bond, Glycoprotein, Immunoglobulin C region, Immunoglobulin domain, IMMUNE SYSTEM
Deposited on
2009-04-30, released
2009-09-08
The last revision prior to the SCOPe 2.03 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.23 Å
R-factor: 0.233
AEROSPACI score: 0.35
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: ig epsilon chain c region
Species: Homo sapiens [TaxId:9606]
Gene: IGHE
Database cross-references and differences (RAF-indexed):
- Uniprot P01854
- engineered (46)
- engineered (58)
Domains in SCOPe 2.03: d3h9ya1, d3h9ya2 - Chain 'B':
Compound: ig epsilon chain c region
Species: Homo sapiens [TaxId:9606]
Gene: IGHE
Database cross-references and differences (RAF-indexed):
- Uniprot P01854
- engineered (46)
- engineered (58)
Domains in SCOPe 2.03: d3h9yb1, d3h9yb2 - Chain 'E':
Compound: ig epsilon chain c region
Species: Homo sapiens [TaxId:9606]
Gene: IGHE
Database cross-references and differences (RAF-indexed):
- Uniprot P01854
- engineered (46)
- engineered (58)
Domains in SCOPe 2.03: d3h9ye1, d3h9ye2 - Heterogens: NH4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3h9yA (A:)
adpcadsnprgvsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqh
strkeekqrngtltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraape
vyafatpewpgsrdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgff
vfsrlevtraeweqkdeficravheaaspsqtvqravsvnpgk
Sequence, based on observed residues (ATOM records): (download)
>3h9yA (A:)
vsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqhstrkeekqrng
tltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraapevyafatpewpg
srdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgffvfsrlevtrae
weqkdeficravheaaspsqtvqravsvn
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3h9yB (B:)
adpcadsnprgvsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqh
strkeekqrngtltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraape
vyafatpewpgsrdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgff
vfsrlevtraeweqkdeficravheaaspsqtvqravsvnpgk
Sequence, based on observed residues (ATOM records): (download)
>3h9yB (B:)
gvsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqhstrkeekqrn
gtltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraapevyafatpewp
gsrdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgffvfsrlevtra
eweqkdeficravheaaspsqtvqravsvn
- Chain 'E':
Sequence, based on SEQRES records: (download)
>3h9yE (E:)
adpcadsnprgvsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqh
strkeekqrngtltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraape
vyafatpewpgsrdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgff
vfsrlevtraeweqkdeficravheaaspsqtvqravsvnpgk
Sequence, based on observed residues (ATOM records): (download)
>3h9yE (E:)
vsaylsrpspfdlfirksptitclvvdlapskgtvqltwsrasgkpvqhstrkeekqrng
tltvtstlpvgtrdwiegetyqcrvthphlpralmrsttktsgpraapevyafatpewpg
srdkrtlacliqnfmpedisvqwlhnevqlpdarhsttqprktkgsgffvfsrlevtrae
weqkdeficravheaaspsqtvqravsvn