PDB entry 3h8l

View 3h8l on RCSB PDB site
Description: The first X-ray structure of a sulfide:quinone oxidoreductase: insights into sulfide oxidation mechanism
Deposited on 2009-04-29, released 2009-06-02
The last revision was dated 2009-06-23, with a file datestamp of 2009-06-19.
Experiment type: XRAY
Resolution: 2.57 Å
R-factor: 0.195
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nadh oxidase
    Species: Acidianus ambivalens [TaxId:2283]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7ZAG8
      • see remark 999 (348)
  • Chain 'B':
    Compound: nadh oxidase
    Species: Acidianus ambivalens [TaxId:2283]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7ZAG8
      • see remark 999 (348)
  • Heterogens: FAD, S3H, PO4, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3h8lA (A:)
mtkvlvlggrfgaltaaytlkrlvgskadvkvinksrfsyfrpalphvaigvrdvdelkv
dlsealpekgiqfqegtvekidakssmvyytkpdgsmaeeeydyvivgigahlatelvkg
wdkygysvcepefatklreklesfqggniaigsgpfyqghnpkpkvpenfvpnadsaceg
pvfemslmlhgyfkkkgmldkvhvtvfspgeylsdlspnsrkavasiynqlgiklvhnfk
ikeireheivdekgntipaditillppytgnpalknstpdlvddggfiptdlnmvsikyd
nvyavgdansmtvpklgylavmtgriaaqhlanrlgvptkvdkyyptivcvadnpyegya
vsvkddtwyggtvsiadpaavnhlkkelftkyymwtkgdmalekflasw

    Sequence, based on observed residues (ATOM records):
    >3h8lA (A:)
tkvlvlggrfgaltaaytlkrlvgskadvkvinksrfsyfrpalphvaigvrdvdelkvd
lsealpekgiqfqegtvekidakssmvyytkpdgsmaeeeydyvivgigahlatelvkgw
dkygysvcepefatklreklesfqggniaigsgpfyqghnpkpkvpenfvpnadsacegp
vfemslmlhgyfkkkgmldkvhvtvfspgeylsdlspnsrkavasiynqlgiklvhnfki
keireheivdekgntipaditillppytgnpalknstpdlvddggfiptdlnmvsikydn
vyavgdansmtvpklgylavmtgriaaqhlanrlgvptkvdkyyptivcvadnpye

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3h8lB (B:)
mtkvlvlggrfgaltaaytlkrlvgskadvkvinksrfsyfrpalphvaigvrdvdelkv
dlsealpekgiqfqegtvekidakssmvyytkpdgsmaeeeydyvivgigahlatelvkg
wdkygysvcepefatklreklesfqggniaigsgpfyqghnpkpkvpenfvpnadsaceg
pvfemslmlhgyfkkkgmldkvhvtvfspgeylsdlspnsrkavasiynqlgiklvhnfk
ikeireheivdekgntipaditillppytgnpalknstpdlvddggfiptdlnmvsikyd
nvyavgdansmtvpklgylavmtgriaaqhlanrlgvptkvdkyyptivcvadnpyegya
vsvkddtwyggtvsiadpaavnhlkkelftkyymwtkgdmalekflasw

    Sequence, based on observed residues (ATOM records):
    >3h8lB (B:)
tkvlvlggrfgaltaaytlkrlvgskadvkvinksrfsyfrpalphvaigvrdvdelkvd
lsealpekgiqfqegtvekidakssmvyytkpdgsmaeeeydyvivgigahlatelvkgw
dkygysvcepefatklreklesfqggniaigsgpfyqghnpkpkvpenfvpnadsacegp
vfemslmlhgyfkkkgmldkvhvtvfspgeylsdlspnsrkavasiynqlgiklvhnfki
keireheivdekgntipaditillppytgnpalknstpdlvddggfiptdlnmvsikydn
vyavgdansmtvpklgylavmtgriaaqhlanrlgvptkvdkyyptivcvadnpye