PDB entry 3h5x

View 3h5x on RCSB PDB site
Description: Crystal Structure of 2'-amino-2'-deoxy-cytidine-5'-triphosphate bound to Norovirus GII RNA polymerase
Class: Transferase/RNA
Keywords: POLYMERASE-RNA COMPLEX, NON-NATURAL NUCLEOSIDE TRIPHOSPHATE ANALOG, CALICIVIRUS, Hydrolase, Nucleotide-binding, Nucleotidyltransferase, Protease, RNA replication, RNA-directed RNA polymerase, Thiol protease, Transferase, Transferase-RNA COMPLEX
Deposited on 2009-04-22, released 2009-05-19
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.77 Å
R-factor: 0.207
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: RNA dependent RNA polymerase
    Species: Norwalk virus [TaxId:11983]
    Gene: polymerase
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3h5xa_
  • Chain 'P':
    Compound: 5'-r(*up*gp*cp*cp*cp*gp*gp*g)-3'
  • Chain 'T':
    Compound: 5'-r(p*up*gp*cp*cp*cp*gp*gp*gp*c)-3'
  • Heterogens: MN, CSG, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3h5xA (A:)
gsdskgtycgapilgpgsapklstktkfwrsstaplppgtyepaylggkdprvkggpslq
qvmrdqlkpfteprgkppkpsvleaakktiinvleqtidppdkwsfaqacasldkttssg
hphhmrkndcwngesftgkladqaskanlmfeegknmtpvytgalkdelvktdkiygkik
krllwgsdlatmircarafgglmdelkthcvtlpirvgmnmnedgpiiferhsryryhyd
adysrwdstqqravlaaaleimvkfssephlaqvvaedllspsvvdvgdftisineglps
gvpctsqwnsiahwlltlcalsevtnlspdiiqanslfsfygddeivstdikldpeklta
klkeyglkptrpdktegplvisedlngltflrrtvtrdpagwfgkleqssilrqmywtrg
pnhedpsetmiphsqrpiqlmsllgeaalhgpafyskisklviaelkeggmdfyvprqep
mfrwmrfsdlstwegdrnlapsfvnedgve

    Sequence, based on observed residues (ATOM records): (download) 
    >3h5xA (A:)
gtycgapilgpgsapklstktkfwrsstaplppgtyepaylggkdprvkggpslqqvmrd
qlkpfteprgkppkpsvleaakktiinvleqtidppdkwsfaqacasldkttssghphhm
rkndcwngesftgkladqaskanlmfeegknmtpvytgalkdelvktdkiygkikkrllw
gsdlatmircarafgglmdelkthcvtlpirvgmnmnedgpiiferhsryryhydadysr
wdstqqravlaaaleimvkfssephlaqvvaedllspsvvdvgdftisineglpsgvpct
sqwnsiahwlltlcalsevtnlspdiiqanslfsfygddeivstdikldpekltaklkey
glkptplvisedlngltflrrtvtrdpagwfgkleqssilrqmywtrgpnhedpsetmip
hsqrpiqlmsllgeaalhgpafyskisklviaedfyvprqepmfrwmrfs

  • Chain 'P':
    No sequence available.

  • Chain 'T':
    No sequence available.