PDB entry 3h5o

View 3h5o on RCSB PDB site
Description: The crystal structure of transcription regulator GntR from Chromobacterium violaceum
Class: transcription regulator
Keywords: 11234b, transcription regulator, GntR,Chromobacterium violaceum, PSI, SGX, DNA-binding, Transcription, Transcription regulation, Structural Genomics, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC
Deposited on 2009-04-22, released 2009-05-05
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-05-05, with a file datestamp of 2009-05-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.191
AEROSPACI score: 0.36 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Transcriptional regulator GntR
    Species: Chromobacterium violaceum [TaxId:536]
    Gene: CV_2956, gntR
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7NTU7 (Start-330)
      • expression tag (331-332)
    Domains in SCOPe 2.06: d3h5oa1, d3h5oa2
  • Chain 'B':
    Compound: Transcriptional regulator GntR
    Species: Chromobacterium violaceum [TaxId:536]
    Gene: CV_2956, gntR
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q7NTU7 (Start-330)
      • expression tag (331-332)
    Domains in SCOPe 2.06: d3h5ob1, d3h5ob2
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3h5oA (A:)
mslgvtmhdvakaagvsaitvsrvlnqpqqvseqlrekvmqavdalayvpsrsastlasa
ksrtvlvlipslantvfletltgietvldaagyqmlignshydagqelqllraylqhrpd
gvlitglshaepferilsqhalpvvymmdladdgrccvgfsqedagaaitrhllsrgkrr
igflgaqldervmkrldgyraaldaadcrdaglewldpqpssmqmgadmldralaerpdc
dalfccnddlaigalarsqqlgiavperlaiagfndlqpaawctpplttvatprrdigvh
aakallqlidgeepasrradlgfrlmlrrsseghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3h5oA (A:)
rtvlvlipslantvfletltgietvldaagyqmlignshydagqelqllraylqhrpdgv
litglshaepferilsqhalpvvymmdladdgrccvgfsqedagaaitrhllsrgkrrig
flgaqldervmkrldgyraaldaadcrdaglewldpqpssmqmgadmldralaerpdcda
lfccnddlaigalarsqqlgiavperlaiagfndlqpaawctpplttvatprrdigvhaa
kallqlidgeepasrradlgfrlmlrrsseg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3h5oB (B:)
mslgvtmhdvakaagvsaitvsrvlnqpqqvseqlrekvmqavdalayvpsrsastlasa
ksrtvlvlipslantvfletltgietvldaagyqmlignshydagqelqllraylqhrpd
gvlitglshaepferilsqhalpvvymmdladdgrccvgfsqedagaaitrhllsrgkrr
igflgaqldervmkrldgyraaldaadcrdaglewldpqpssmqmgadmldralaerpdc
dalfccnddlaigalarsqqlgiavperlaiagfndlqpaawctpplttvatprrdigvh
aakallqlidgeepasrradlgfrlmlrrsseghhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3h5oB (B:)
rtvlvlipslantvfletltgietvldaagyqmlignshydagqelqllraylqhrpdgv
litglshaepferilsqhalpvvymmdladdgrccvgfsqedagaaitrhllsrgkrrig
flgaqldervmkrldgyraaldaadcrdaglewldpqpssmqmgadmldralaerpdcda
lfccnddlaigalarsqqlgiavperlaiagfndlqpaawctpplttvatprrdigvhaa
kallqlidgeepasrradlgfrlmlrrsseg