PDB entry 3h3o

View 3h3o on RCSB PDB site
Description: Glycerol Kinase H232R with Ethylene Glycol
Class: transferase
Keywords: ethylene glycol, kinase, ATP-binding, Glycerol metabolism, Nucleotide-binding, Phosphoprotein, Transferase
Deposited on 2009-04-16, released 2009-06-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.181
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: glycerol kinase
    Species: Enterococcus casseliflavus [TaxId:37734]
    Gene: GLPK
    Database cross-references and differences (RAF-indexed):
    • Uniprot O34153
      • engineered (231)
    Domains in SCOPe 2.08: d3h3ob1, d3h3ob2
  • Chain 'C':
    Compound: glycerol kinase
    Species: Enterococcus casseliflavus [TaxId:37734]
    Gene: GLPK
    Database cross-references and differences (RAF-indexed):
    • Uniprot O34153
      • engineered (231)
    Domains in SCOPe 2.08: d3h3oc1, d3h3oc2
  • Chain 'O':
    Compound: glycerol kinase
    Species: Enterococcus casseliflavus [TaxId:37734]
    Gene: GLPK
    Database cross-references and differences (RAF-indexed):
    • Uniprot O34153
      • engineered (231)
    Domains in SCOPe 2.08: d3h3oo1, d3h3oo2
  • Chain 'X':
    Compound: glycerol kinase
    Species: Enterococcus casseliflavus [TaxId:37734]
    Gene: GLPK
    Database cross-references and differences (RAF-indexed):
    • Uniprot O34153
      • engineered (231)
    Domains in SCOPe 2.08: d3h3ox1, d3h3ox2
  • Heterogens: EDO, PO4, HOH

PDB Chain Sequences:

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3h3oB (B:)
maeknyvmaidqgttssraiifdrngkkigssqkefpqyfpksgwvehnaneiwnsvqsv
iagafiesgirpeaiagigitnqrettvvwdkttgqpianaivwqsrqsspiadqlkvdg
htemihektglvidayfsatkvrwlldniegaqekadngellfgtidswlvwkltdgqvh
vtdysnasrtmlynihklewdqeildllnipssmlpevksnsevyghtrsyrfygsevpi
agmagdqqaalfgqmafekgmikntygtgafivmntgeepqlsdndllttigygingkvy
yalegsifvagsaiqwlrdglrmietspqseelaakakgdnevyvvpaftglgapywdse
argavfgltrgttkedfvratlqavayqskdvidtmkkdsgidipllkvdggaakndllm
qfqadildidvqraanlettalgaaylaglavgfwkdldelksmaeegqmftpempaeer
dnlyegwkqavaatqtfkfkakkege

    Sequence, based on observed residues (ATOM records): (download) 
    >3h3oB (B:)
eknyvmaidqgttssraiifdrngkkigssqkefpqyfpksgwvehnaneiwnsvqsvia
gafiesgirpeaiagigitnqrettvvwdkttgqpianaivwqsrqsspiadqlkvdght
emihektglvidayfsatkvrwlldniegaqekadngellfgtidswlvwkltdgqvhvt
dysnasrtmlynihklewdqeildllnipssmlpevksnsevyghtrsyrfygsevpiag
magdqqaalfgqmafekgmikntygtgafivmntgeepqlsdndllttigygingkvyya
legsifvagsaiqwlrdglrmietspqseelaakakgdnevyvvpaftglgapywdsear
gavfgltrgttkedfvratlqavayqskdvidtmkkdsgidipllkvdggaakndllmqf
qadildidvqraanlettalgaaylaglavgfwkdldelksmaeegqmftpempaeerdn
lyegwkqavaatqtfkfka

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3h3oC (C:)
maeknyvmaidqgttssraiifdrngkkigssqkefpqyfpksgwvehnaneiwnsvqsv
iagafiesgirpeaiagigitnqrettvvwdkttgqpianaivwqsrqsspiadqlkvdg
htemihektglvidayfsatkvrwlldniegaqekadngellfgtidswlvwkltdgqvh
vtdysnasrtmlynihklewdqeildllnipssmlpevksnsevyghtrsyrfygsevpi
agmagdqqaalfgqmafekgmikntygtgafivmntgeepqlsdndllttigygingkvy
yalegsifvagsaiqwlrdglrmietspqseelaakakgdnevyvvpaftglgapywdse
argavfgltrgttkedfvratlqavayqskdvidtmkkdsgidipllkvdggaakndllm
qfqadildidvqraanlettalgaaylaglavgfwkdldelksmaeegqmftpempaeer
dnlyegwkqavaatqtfkfkakkege

    Sequence, based on observed residues (ATOM records): (download) 
    >3h3oC (C:)
nyvmaidqgttssraiifdrngkkigssqkefpqyfpksgwvehnaneiwnsvqsviaga
fiesgirpeaiagigitnqrettvvwdkttgqpianaivwqsrqsspiadqlkvdghtem
ihektglvidayfsatkvrwlldniegaqekadngellfgtidswlvwkltdgqvhvtdy
snasrtmlynihklewdqeildllnipssmlpevksnsevyghtrsyrfygsevpiagma
gdqqaalfgqmafekgmikntygtgafivmntgeepqlsdndllttigygingkvyyale
gsifvagsaiqwlrdglrmietspqseelaakakgdnevyvvpaftglgapywdsearga
vfgltrgttkedfvratlqavayqskdvidtmkkdsgidipllkvdggaakndllmqfqa
dildidvqraanlettalgaaylaglavgfwkdldelksmaeegqmftpempaeerdnly
egwkqavaatqtfkfkak

  • Chain 'O':
    Sequence, based on SEQRES records: (download) 
    >3h3oO (O:)
maeknyvmaidqgttssraiifdrngkkigssqkefpqyfpksgwvehnaneiwnsvqsv
iagafiesgirpeaiagigitnqrettvvwdkttgqpianaivwqsrqsspiadqlkvdg
htemihektglvidayfsatkvrwlldniegaqekadngellfgtidswlvwkltdgqvh
vtdysnasrtmlynihklewdqeildllnipssmlpevksnsevyghtrsyrfygsevpi
agmagdqqaalfgqmafekgmikntygtgafivmntgeepqlsdndllttigygingkvy
yalegsifvagsaiqwlrdglrmietspqseelaakakgdnevyvvpaftglgapywdse
argavfgltrgttkedfvratlqavayqskdvidtmkkdsgidipllkvdggaakndllm
qfqadildidvqraanlettalgaaylaglavgfwkdldelksmaeegqmftpempaeer
dnlyegwkqavaatqtfkfkakkege

    Sequence, based on observed residues (ATOM records): (download) 
    >3h3oO (O:)
eknyvmaidqgttssraiifdrngkkigssqkefpqyfpksgwvehnaneiwnsvqsvia
gafiesgirpeaiagigitnqrettvvwdkttgqpianaivwqsrqsspiadqlkvdght
emihektglvidayfsatkvrwlldniegaqekadngellfgtidswlvwkltdgqvhvt
dysnasrtmlynihklewdqeildllnipssmlpevksnsevyghtrsyrfygsevpiag
magdqqaalfgqmafekgmikntygtgafivmntgeepqlsdndllttigygingkvyya
legsifvagsaiqwlrdglrmietspqseelaakakgdnevyvvpaftglgapywdsear
gavfgltrgttkedfvratlqavayqskdvidtmkkdsgidipllkvdggaakndllmqf
qadildidvqraanlettalgaaylaglavgfwkdldelksmaeegqmftpempaeerdn
lyegwkqavaatqtfkfk

  • Chain 'X':
    Sequence, based on SEQRES records: (download) 
    >3h3oX (X:)
maeknyvmaidqgttssraiifdrngkkigssqkefpqyfpksgwvehnaneiwnsvqsv
iagafiesgirpeaiagigitnqrettvvwdkttgqpianaivwqsrqsspiadqlkvdg
htemihektglvidayfsatkvrwlldniegaqekadngellfgtidswlvwkltdgqvh
vtdysnasrtmlynihklewdqeildllnipssmlpevksnsevyghtrsyrfygsevpi
agmagdqqaalfgqmafekgmikntygtgafivmntgeepqlsdndllttigygingkvy
yalegsifvagsaiqwlrdglrmietspqseelaakakgdnevyvvpaftglgapywdse
argavfgltrgttkedfvratlqavayqskdvidtmkkdsgidipllkvdggaakndllm
qfqadildidvqraanlettalgaaylaglavgfwkdldelksmaeegqmftpempaeer
dnlyegwkqavaatqtfkfkakkege

    Sequence, based on observed residues (ATOM records): (download) 
    >3h3oX (X:)
eknyvmaidqgttssraiifdrngkkigssqkefpqyfpksgwvehnaneiwnsvqsvia
gafiesgirpeaiagigitnqrettvvwdkttgqpianaivwqsrqsspiadqlkvdght
emihektglvidayfsatkvrwlldniegaqekadngellfgtidswlvwkltdgqvhvt
dysnasrtmlynihklewdqeildllnipssmlpevksnsevyghtrsyrfygsevpiag
magdqqaalfgqmafekgmikntygtgafivmntgeepqlsdndllttigygingkvyya
legsifvagsaiqwlrdglrmietspqseelaakakgdnevyvvpaftglgapywdsear
gavfgltrgttkedfvratlqavayqskdvidtmkkdsgidipllkvdggaakndllmqf
qadildidvqraanlettalgaaylaglavgfwkdldelksmaeegqmftpempaeerdn
lyegwkqavaatqtfkfka