PDB entry 3h1i

View 3h1i on RCSB PDB site
Description: Stigmatellin and antimycin bound cytochrome bc1 complex from chicken
Deposited on 2009-04-12, released 2009-04-28
The last revision was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 3.53 Å
R-factor: 0.263
AEROSPACI score: 0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquinol-cytochrome-c reductase complex core protein I, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I
  • Chain 'B':
    Compound: Ubiquinol-cytochrome-c reductase complex core protein 2, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I (Start-440)
  • Chain 'C':
    Compound: cytochrome b
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Cytochrome c1, heme protein, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I (0-240)
  • Chain 'E':
    Compound: Cytochrome b-c1 complex subunit Rieske, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'F':
    Compound: Ubiquinol-cytochrome c reductase complex 14 kDa protein
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I (Start-109)
  • Chain 'G':
    Compound: ubiquinol-cytochrome c reductase complex ubiquinone-binding protein qp-c
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I (0-80)
  • Chain 'H':
    Compound: Ubiquinol-cytochrome c reductase complex 11 kDa protein
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I (Start-76)
  • Chain 'I':
    Compound: Cytochrome b-c1 complex subunit Rieske, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'J':
    Compound: Ubiquinol-cytochrome c reductase complex 7.2 kDa protein
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I (0-60)
  • Chain 'N':
    Compound: Ubiquinol-cytochrome-c reductase complex core protein I, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I
  • Chain 'O':
    Compound: Ubiquinol-cytochrome-c reductase complex core protein 2, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I (Start-440)
  • Chain 'P':
    Compound: cytochrome b
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'Q':
    Compound: Cytochrome c1, heme protein, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I (0-240)
  • Chain 'R':
    Compound: Cytochrome b-c1 complex subunit Rieske, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'S':
    Compound: Ubiquinol-cytochrome c reductase complex 14 kDa protein
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I (Start-109)
  • Chain 'T':
    Compound: ubiquinol-cytochrome c reductase complex ubiquinone-binding protein qp-c
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I (0-End)
  • Chain 'U':
    Compound: Ubiquinol-cytochrome c reductase complex 11 kDa protein
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I (Start-76)
  • Chain 'V':
    Compound: Cytochrome b-c1 complex subunit Rieske, mitochondrial
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
  • Chain 'W':
    Compound: Ubiquinol-cytochrome c reductase complex 7.2 kDa protein
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • PDB 3H1I (0-End)
  • Heterogens: HEM, HEC, FES, SMA, ANY, CDL, PEE, PLC, UNL, GOL

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3h1iA (A:)
aatyaqtlqnipetnvttldnglrvaseessqptctvgvwigagsryeneknngagyfve
hlafkgtkkrpcaafekevesmgahfngytsreqtafyikalskdmpkvvelladvvqnc
aleesqiekergvilqelkemdndmtnvtfdylhatafqgtalartvegttenikhltra
dlasyidthfkaprmvlaaaggishkelvdaarqhfsgvsftykedavpilprcrftgse
irarddalpvahvalavegpgwadpdnvvlhvanaiigrydrtfgggkhlssrlaalave
hklchsfqtfntsysdtglfgfhfvadplsiddmmfcaqgewmrlctsttesevkraknh
lrsamvaqldgttpvcetigshllnygrrisleewdsrisavdarmvrdvcskyiydkcp
alaavgpieqlldynrirsgmywirf

    Sequence, based on observed residues (ATOM records):
    >3h1iA (A:)
atyaqtlqnipetnvttldnglrvaseessqptctvgvwigagsryeneknngagyfveh
lafkgtkkrpcaafekevesmgahfngytsreqtafyikalskdmpkvvelladvvqnca
leesqiekergvilqelkemdndmtnvtfdylhatafqgtalartvegttenikhltrad
lasyidthfkaprmvlaaaggishkelvdaarqhfsgvsftykedavpilprcrftgsei
rarddalpvahvalavegpgwadpdnvvlhvanaiigrydrtfgggkhlssrlaalaveh
klchsfqtfntsysdtglfgfhfvadplsiddmmfcaqgewmrlctsttesevkraknhl
rsamvaqldgttpvcetigshllnygrrisleewdsrisavdarmvrdvcskyiydkcpa
laavgpieqlldynrirsgmywi

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3h1iB (B:)
slkvapkvavsaaaervklcpgaedleitklpngliiaslenfspasrigvfikagsrye
ttanlgtahllrlasplttkgassfritrgieavggslsvystrekmtycveclrdhvdt
vmeyllnvttapefrpwevtdlqpqlkvdkavafqspqvgvlenlhaaayktalanplyc
pdyrigkitseqlhhfvqnnftsarmalvgigvkhsdlkqvaeqflnirsgagtssakat
ywggeireqnghslvhaavvtegaavgsaeanafsvlqhvlgagplikrgssvtsklyqg
vakattqpfdasafnvnysdsglfgfytisqaahageviraamnqlkaaaqggvteedvt
kaknqlkatylmsvetaqgllneigseallsgthtapsvvaqkidsvtsadvvnaakkfv
sgkksmaasgdlgstpfldel

    Sequence, based on observed residues (ATOM records):
    >3h1iB (B:)
pgaedleitklpngliiaslenfspasrigvfikagsryettanlgtahllrlasplttk
gassfritrgieavggslsvystrekmtycveclrdhvdtvmeyllnvttapefrpwevt
dlqpqlkvdkavafqspqvgvlenlhaaayktalanplycpdyrigkitseqlhhfvqnn
ftsarmalvgigvkhsdlkqvaeqflnirsgagtssakatywggeireqnghslvhaavv
tegaavgsaeanafsvlqhvlgagplikrgssvtsklyqgvakattqpfdasafnvnysd
sglfgfytisqaahageviraamnqlkaaaqggvteedvtkaknqlkatylmsvetaqgl
lneigseallsgthtapsvvaqkidsvtsadvvnaakkfvsgkksmaasgdlgstpflde
l

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >3h1iC (C:)
mapnirkshpllkminnslidlpapsnisawwnfgsllavclmtqiltglllamhytadt
slafssvahtcrnvqygwlirnlhangasffficiflhigrglyygsylyketwntgvil
lltlmatafvgyvlpwgqmsfwgatvitnlfsaipyightlvewawggfsvdnptltrff
alhfllpfaiagitiihltflhesgsnnplgissdsdkipfhpyysfkdilgltlmltpf
ltlalfspnllgdpenftpanplvtpphikpewyflfayailrsipnklggvlalaasvl
ilflipflhkskqrtmtfrplsqtlfwllvanlliltwigsqpvehpfiiigqmaslsyf
tillilfptigtlenkmlny

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >3h1iD (D:)
gelelhppafpwshggplsaldhssvrrgfqvykqvcsachsmdyvafrnligvthteae
akalaeevevqdgpdengelfmrpgkisdyfpkpypnpeaaraanngalppdlsyivnar
hggedyvfslltgycdppagvvvreglhynpyfpgqaigmappiyneileyddgtpatms
qiakdvctflrwaaepehdqrkrmglkmllisalltsllyymkrhkwsvlksrkmayrpp
k

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records:
    >3h1iE (E:)
vhndvtvpdfsayrredvmdattssqtssedrkgfsylvtatacvatayaaknvvtqfis
slsasadvlalskieiklsdipegknvafkwrgkplfvrhrtqaeinqeaevdvsklrdp
qhdldrvkkpewvilvgvcthlgcvpiansgdfggyycpchgshydasgrirkgpapynl
evptyqfvgddlvvvg

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3h1iF (F:)
aaratvagggrlmdrirkwyynaagfnkyglmrddtlyedddvkealkrlpedlynermf
rikraldlslkhrilpkeqwvkyeedkpylepylkevirerlereawnkk

    Sequence, based on observed residues (ATOM records):
    >3h1iF (F:)
grlmdrirkwyynaagfnkyglmrddtlyedddvkealkrlpedlynermfrikraldls
lkhrilpkeqwvkyeedkpylepylkevirerlereawnkk

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >3h1iG (G:)
gihfgnlarvrhiityslspfeqraipnifsdalpnvwrrfssqvfkvappflgayllys
wgtqeferlkrknpadyendq

  • Chain 'H':
    Sequence, based on SEQRES records:
    >3h1iH (H:)
lrgsgeeeeeelvdplttirehceqtekcvkarerlelcdarvssrshteeqcteelfdf
lhardhcvahklfnklk

    Sequence, based on observed residues (ATOM records):
    >3h1iH (H:)
eeeelvdplttirehceqtekcvkarerlelcdarvssrshteeqcteelfdflhardhc
vahklfnklk

  • Chain 'I':
    Sequence, based on SEQRES records:
    >3h1iI (I:)
xxxxxxxxxxxxxxxrpllcresmsgrsarrdlvagislnapasvry

    Sequence, based on observed residues (ATOM records):
    >3h1iI (I:)
xxxxxxxxxxxxxxxrpllcresmsgrsarrdlvagislnapasvr

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >3h1iJ (J:)
allrqaysalfrrtstfaltvvlgavlferafdqgadaifehlnegklwkhikhkyease
e

  • Chain 'N':
    Sequence, based on SEQRES records:
    >3h1iN (N:)
aatyaqtlqnipetnvttldnglrvaseessqptctvgvwigagsryeneknngagyfve
hlafkgtkkrpcaafekevesmgahfngytsreqtafyikalskdmpkvvelladvvqnc
aleesqiekergvilqelkemdndmtnvtfdylhatafqgtalartvegttenikhltra
dlasyidthfkaprmvlaaaggishkelvdaarqhfsgvsftykedavpilprcrftgse
irarddalpvahvalavegpgwadpdnvvlhvanaiigrydrtfgggkhlssrlaalave
hklchsfqtfntsysdtglfgfhfvadplsiddmmfcaqgewmrlctsttesevkraknh
lrsamvaqldgttpvcetigshllnygrrisleewdsrisavdarmvrdvcskyiydkcp
alaavgpieqlldynrirsgmywirf

    Sequence, based on observed residues (ATOM records):
    >3h1iN (N:)
tyaqtlqnipetnvttldnglrvaseessqptctvgvwigagsryeneknngagyfvehl
afkgtkkrpcaafekevesmgahfngytsreqtafyikalskdmpkvvelladvvqncal
eesqiekergvilqelkemdndmtnvtfdylhatafqgtalartvegttenikhltradl
asyidthfkaprmvlaaaggishkelvdaarqhfsgvsftykedavpilprcrftgseir
arddalpvahvalavegpgwadpdnvvlhvanaiigrydrtfgggkhlssrlaalavehk
lchsfqtfntsysdtglfgfhfvadplsiddmmfcaqgewmrlctsttesevkraknhlr
samvaqldgttpvcetigshllnygrrisleewdsrisavdarmvrdvcskyiydkcpal
aavgpieqlldynrirsgmywi

  • Chain 'O':
    Sequence, based on SEQRES records:
    >3h1iO (O:)
slkvapkvavsaaaervklcpgaedleitklpngliiaslenfspasrigvfikagsrye
ttanlgtahllrlasplttkgassfritrgieavggslsvystrekmtycveclrdhvdt
vmeyllnvttapefrpwevtdlqpqlkvdkavafqspqvgvlenlhaaayktalanplyc
pdyrigkitseqlhhfvqnnftsarmalvgigvkhsdlkqvaeqflnirsgagtssakat
ywggeireqnghslvhaavvtegaavgsaeanafsvlqhvlgagplikrgssvtsklyqg
vakattqpfdasafnvnysdsglfgfytisqaahageviraamnqlkaaaqggvteedvt
kaknqlkatylmsvetaqgllneigseallsgthtapsvvaqkidsvtsadvvnaakkfv
sgkksmaasgdlgstpfldel

    Sequence, based on observed residues (ATOM records):
    >3h1iO (O:)
cpgaedleitklpngliiaslenfspasrigvfikagsryettanlgtahllrlaspltt
kgassfritrgieavggslsvystrekmtycveclrdhvdtvmeyllnvttapefrpwev
tdlqpqlkvdkavafqspqvgvlenlhaaayktalanplycpdyrigkitseqlhhfvqn
nftsarmalvgigvkhsdlkqvaeqflnirsgagtssakatywggeireqnghslvhaav
vtegaavgsaeanafsvlqhvlgagplikrgssvtsklyqgvakattqpfdasafnvnys
dsglfgfytisqaahageviraamnqlkaaaqggvteedvtkaknqlkatylmsvetaqg
llneigseallsgthtapsvvaqkidsvtsadvvnaakkfvsgkksmaasgdlgstpfld
el

  • Chain 'P':
    Sequence, based on SEQRES records:
    >3h1iP (P:)
mapnirkshpllkminnslidlpapsnisawwnfgsllavclmtqiltglllamhytadt
slafssvahtcrnvqygwlirnlhangasffficiflhigrglyygsylyketwntgvil
lltlmatafvgyvlpwgqmsfwgatvitnlfsaipyightlvewawggfsvdnptltrff
alhfllpfaiagitiihltflhesgsnnplgissdsdkipfhpyysfkdilgltlmltpf
ltlalfspnllgdpenftpanplvtpphikpewyflfayailrsipnklggvlalaasvl
ilflipflhkskqrtmtfrplsqtlfwllvanlliltwigsqpvehpfiiigqmaslsyf
tillilfptigtlenkmlny

    Sequence, based on observed residues (ATOM records):
    >3h1iP (P:)
apnirkshpllkminnslidlpapsnisawwnfgsllavclmtqiltglllamhytadts
lafssvahtcrnvqygwlirnlhangasffficiflhigrglyygsylyketwntgvill
ltlmatafvgyvlpwgqmsfwgatvitnlfsaipyightlvewawggfsvdnptltrffa
lhfllpfaiagitiihltflhesgsnnplgissdsdkipfhpyysfkdilgltlmltpfl
tlalfspnllgdpenftpanplvtpphikpewyflfayailrsipnklggvlalaasvli
lflipflhkskqrtmtfrplsqtlfwllvanlliltwigsqpvehpfiiigqmaslsyft
illilfptigtlenkmlny

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records:
    >3h1iQ (Q:)
gelelhppafpwshggplsaldhssvrrgfqvykqvcsachsmdyvafrnligvthteae
akalaeevevqdgpdengelfmrpgkisdyfpkpypnpeaaraanngalppdlsyivnar
hggedyvfslltgycdppagvvvreglhynpyfpgqaigmappiyneileyddgtpatms
qiakdvctflrwaaepehdqrkrmglkmllisalltsllyymkrhkwsvlksrkmayrpp
k

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records:
    >3h1iR (R:)
vhndvtvpdfsayrredvmdattssqtssedrkgfsylvtatacvatayaaknvvtqfis
slsasadvlalskieiklsdipegknvafkwrgkplfvrhrtqaeinqeaevdvsklrdp
qhdldrvkkpewvilvgvcthlgcvpiansgdfggyycpchgshydasgrirkgpapynl
evptyqfvgddlvvvg

  • Chain 'S':
    Sequence, based on SEQRES records:
    >3h1iS (S:)
aaratvagggrlmdrirkwyynaagfnkyglmrddtlyedddvkealkrlpedlynermf
rikraldlslkhrilpkeqwvkyeedkpylepylkevirerlereawnkk

    Sequence, based on observed residues (ATOM records):
    >3h1iS (S:)
grlmdrirkwyynaagfnkyglmrddtlyedddvkealkrlpedlynermfrikraldls
lkhrilpkeqwvkyeedkpylepylkevirerlereawnkk

  • Chain 'T':
    Sequence, based on SEQRES records:
    >3h1iT (T:)
gihfgnlarvrhiityslspfeqraipnifsdalpnvwrrfssqvfkvappflgayllys
wgtqeferlkrknpadyendq

    Sequence, based on observed residues (ATOM records):
    >3h1iT (T:)
gihfgnlarvrhiityslspfeqraipnifsdalpnvwrrfssqvfkvappflgayllys
wgtqeferlkrknpadyen

  • Chain 'U':
    Sequence, based on SEQRES records:
    >3h1iU (U:)
lrgsgeeeeeelvdplttirehceqtekcvkarerlelcdarvssrshteeqcteelfdf
lhardhcvahklfnklk

    Sequence, based on observed residues (ATOM records):
    >3h1iU (U:)
elvdplttirehceqtekcvkarerlelcdarvssrshteeqcteelfdflhardhcvah
klfnklk

  • Chain 'V':
    Sequence, based on SEQRES records:
    >3h1iV (V:)
xxxxxxxxxxxxxxxrpllcresmsgrsarrdlvagislnapasvry

    Sequence, based on observed residues (ATOM records):
    >3h1iV (V:)
xxxxxxxxxxxxxrpllcresmsgrsarrdlvagislnapasvr

  • Chain 'W':
    Sequence, based on SEQRES records:
    >3h1iW (W:)
allrqaysalfrrtstfaltvvlgavlferafdqgadaifehlnegklwkhikhkyease
e

    Sequence, based on observed residues (ATOM records):
    >3h1iW (W:)
allrqaysalfrrtstfaltvvlgavlferafdqgadaifehlnegklwkhikhkyeas