PDB entry 3gzt

View 3gzt on RCSB PDB site
Description: vp7 recoated rotavirus dlp
Deposited on 2009-04-07, released 2009-07-14
The last revision was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: EM
Resolution: 3.8 Å
R-factor: N/A
AEROSPACI score: 0.1 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Chain 'F':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Chain 'G':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Chain 'H':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Chain 'I':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Chain 'J':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Chain 'K':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Chain 'L':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Chain 'M':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Chain 'N':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Chain 'O':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Chain 'P':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Chain 'Q':
    Compound: Outer capsid glycoprotein VP7
    Species: Rhesus rotavirus [TaxId:10969]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12476 (0-254)
      • variant (113)
  • Heterogens: CA

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >3gztB (B:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records:
    >3gztF (F:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records:
    >3gztG (G:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records:
    >3gztH (H:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records:
    >3gztI (I:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records:
    >3gztJ (J:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records:
    >3gztK (K:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records:
    >3gztL (L:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records:
    >3gztM (M:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records:
    >3gztN (N:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records:
    >3gztO (O:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records:
    >3gztP (P:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records:
    >3gztQ (Q:)
pitgsmdtayanstqeetfltstlclyypteaateindnswkdtlsqlfltkgwptgsvy
fkeytdiasfsvdpqlycdynvvlmkydatlqldmseladlilnewlcnpmditlyyyqq
tdeankwismgssctikvcplntqtlgigclttdtatfeevataeklvitdvvdgvnhkl
dvttatctirnckklgprenvaviqvggsdvlditadpttapqtermmrinwkkwwqvfy
tvvdyvnqiiqamsk