PDB entry 3gz8

View 3gz8 on RCSB PDB site
Description: cocrystal structure of nudix domain of shewanella oneidensis nrtr complexed with adp ribose
Deposited on 2009-04-06, released 2009-06-09
The last revision was dated 2018-04-04, with a file datestamp of 2018-03-29.
Experiment type: XRAY
Resolution: 2.43 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: MutT/nudix family protein
    Species: Shewanella oneidensis [TaxId:70863]
    Gene: NrtR, SO_1979
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: MutT/nudix family protein
    Species: Shewanella oneidensis [TaxId:70863]
    Gene: NrtR, SO_1979
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: MutT/nudix family protein
    Species: Shewanella oneidensis [TaxId:70863]
    Gene: NrtR, SO_1979
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8EFJ3 (3-End)
      • expression tag (2)
  • Chain 'D':
    Compound: MutT/nudix family protein
    Species: Shewanella oneidensis [TaxId:70863]
    Gene: NrtR, SO_1979
    Database cross-references and differences (RAF-indexed):
  • Heterogens: APR, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3gz8A (A:)
gshmteaeylanydpkafkaqlltvdavlftyhdqqlkvllvqrsnhpflglwglpggfi
detcdesleqtvlrklaektavvppyieqlctvgnnsrdargwsvtvcytalmsyqacqi
qiasvsdvkwwpladvlqmplafdhlqlieqarerltqkaly

    Sequence, based on observed residues (ATOM records):
    >3gz8A (A:)
mteaeylanydpkafkaqlltvdavlftyhdqqlkvllvqrsnhpflglwglpggfidet
cdesleqtvlrklaektavvppyieqlctvgnnsrdargwsvtvcytalmsyqacqiqia
svsdvkwwpladvlqmplafdhlqlieqarerlt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3gz8B (B:)
gshmteaeylanydpkafkaqlltvdavlftyhdqqlkvllvqrsnhpflglwglpggfi
detcdesleqtvlrklaektavvppyieqlctvgnnsrdargwsvtvcytalmsyqacqi
qiasvsdvkwwpladvlqmplafdhlqlieqarerltqkaly

    Sequence, based on observed residues (ATOM records):
    >3gz8B (B:)
mteaeylanydpkafkaqlltvdavlftyhdqqlkvllvqrsnhpflglwglpggfidet
cdesleqtvlrklaektavvppyieqlctvgnnsrdargwsvtvcytalmsyqacqiqia
svsdvkwwpladvlqmplafdhlqlieqarerlt

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3gz8C (C:)
gshmteaeylanydpkafkaqlltvdavlftyhdqqlkvllvqrsnhpflglwglpggfi
detcdesleqtvlrklaektavvppyieqlctvgnnsrdargwsvtvcytalmsyqacqi
qiasvsdvkwwpladvlqmplafdhlqlieqarerltqkaly

    Sequence, based on observed residues (ATOM records):
    >3gz8C (C:)
hmteaeylanydpkafkaqlltvdavlftyhdqqlkvllvqrsnhpflglwglpggfide
tcdesleqtvlrklaektavvppyieqlctvgnnsrdargwsvtvcytalmsyqacqiqi
asvsdvkwwpladvlqmplafdhlqlieqarerltq

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3gz8D (D:)
gshmteaeylanydpkafkaqlltvdavlftyhdqqlkvllvqrsnhpflglwglpggfi
detcdesleqtvlrklaektavvppyieqlctvgnnsrdargwsvtvcytalmsyqacqi
qiasvsdvkwwpladvlqmplafdhlqlieqarerltqkaly

    Sequence, based on observed residues (ATOM records):
    >3gz8D (D:)
mteaeylanydpkafkaqlltvdavlftyhdqqlkvllvqrsnhpflglwglpggfidet
cdesleqtvlrklaektavvppyieqlctvgnnsrdargwsvtvcytalmsyqacqiqia
svsdvkwwpladvlqmplafdhlqlieqarerlt