PDB entry 3gyu

View 3gyu on RCSB PDB site
Description: nuclear receptor daf-12 from parasitic nematode strongyloides stercoralis in complex with its physiological ligand dafachronic acid delta 7
Deposited on 2009-04-05, released 2009-07-07
The last revision was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Nuclear hormone receptor of the steroid/thyroid hormone receptors superfamily
    Species: Strongyloides stercoralis [TaxId:6248]
    Gene: daf-12
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: src1
    Database cross-references and differences (RAF-indexed):
    • PDB 3GYU (Start-12)
  • Heterogens: DL7, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3gyuA (A:)
gsytlsekdlkeldsirdsfqcmnepldndqqastlakkehnptdilnvmditmrrlvkm
akrlgafneiseagkfsllkggmiemltirgvtvfnadkgvwqtpvdghsqisfnmfdkl
rpdikdtqkkgflhffnllhsdvrkndlaidiivlmvlfdskreglvsqqdketveklhr
nyesllhrylysihkeeaeqrfasipkalvalrkvaenavtlflgagntteaaslpkeff
atny

    Sequence, based on observed residues (ATOM records):
    >3gyuA (A:)
ytlsekdlkeldsirdsfqcmnepldndqqastlakkehnptdilnvmditmrrlvkmak
rlgafneiseagkfsllkggmiemltirgvtvfnadkgvwqtpvdghsqisfnmfdklrp
dikdtqkkgflhffnllhsdvrkndlaidiivlmvlfdskreglvsqqdketveklhrny
esllhrylysihkeeaeqrfasipkalvalrkvaenavtlflgagntteaaslpkeffat
ny

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3gyuB (B:)
aqqksllqqllte

    Sequence, based on observed residues (ATOM records):
    >3gyuB (B:)
ksllqqllte