PDB entry 3gxv

View 3gxv on RCSB PDB site
Description: Three-dimensional structure of N-terminal domain of DnaB Helicase from Helicobacter pylori and its interactions with primase
Deposited on 2009-04-03, released 2010-01-26
The last revision was dated 2010-01-26, with a file datestamp of 2010-01-22.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.249
AEROSPACI score: 0.32 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Replicative DNA helicase
    Species: Helicobacter pylori [TaxId:210]
    Gene: HP_1362
    Database cross-references and differences (RAF-indexed):
    • Uniprot O25916 (0-120)
      • expression tag (121)
  • Chain 'B':
    Compound: Replicative DNA helicase
    Species: Helicobacter pylori [TaxId:210]
    Gene: HP_1362
    Database cross-references and differences (RAF-indexed):
    • Uniprot O25916 (0-120)
      • expression tag (121-122)
  • Chain 'C':
    Compound: Replicative DNA helicase
    Species: Helicobacter pylori [TaxId:210]
    Gene: HP_1362
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Replicative DNA helicase
    Species: Helicobacter pylori [TaxId:210]
    Gene: HP_1362
    Database cross-references and differences (RAF-indexed):
  • Heterogens: HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3gxvA (A:)
mdhlkhlqqlqnierivlsgivlanhkieevhsvlepsdfyyppnglffeialklheedc
pidenfirqkmpkdkqikeedlvaifaaspidnieayveeiknasikrklfglantireq
ahh

    Sequence, based on observed residues (ATOM records):
    >3gxvA (A:)
mdhlkhlqqlqnierivlsgivlanhkieevhsvlepsdfyyppnglffeialklheedc
pidenfirqkmpkdkqikeedlvaifaaspidnieayveeiknasikrklfglantireq
ah

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records:
    >3gxvB (B:)
mdhlkhlqqlqnierivlsgivlanhkieevhsvlepsdfyyppnglffeialklheedc
pidenfirqkmpkdkqikeedlvaifaaspidnieayveeiknasikrklfglantireq
ahh

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records:
    >3gxvC (C:)
iknasikrklfglantireqal

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records:
    >3gxvD (D:)
veeiknasikrklfglantireqale