PDB entry 3gxa

View 3gxa on RCSB PDB site
Description: Crystal structure of GNA1946
Class: protein binding
Keywords: periplasmic, lipoprotein, l-methionine bingding, protein binding
Deposited on 2009-04-02, released 2009-10-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-02-12, with a file datestamp of 2014-02-07.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.206
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Outer membrane lipoprotein GNA1946
    Species: Neisseria meningitidis [TaxId:487]
    Gene: gna1946
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3gxaa_
  • Chain 'B':
    Compound: Outer membrane lipoprotein GNA1946
    Species: Neisseria meningitidis [TaxId:487]
    Gene: gna1946
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3gxab_
  • Chain 'C':
    Compound: Outer membrane lipoprotein GNA1946
    Species: Neisseria meningitidis [TaxId:487]
    Gene: gna1946
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3gxac_
  • Chain 'D':
    Compound: Outer membrane lipoprotein GNA1946
    Species: Neisseria meningitidis [TaxId:487]
    Gene: gna1946
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3gxad_
  • Chain 'E':
    Compound: Outer membrane lipoprotein GNA1946
    Species: Neisseria meningitidis [TaxId:487]
    Gene: gna1946
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3gxae_
  • Chain 'F':
    Compound: Outer membrane lipoprotein GNA1946
    Species: Neisseria meningitidis [TaxId:487]
    Gene: gna1946
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3gxaf_
  • Heterogens: SO4, MET, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3gxaA (A:)
mgqkdsapaasasaaadngaakkeivfgttvgdfgdmvkeqiqpelekkgytvklveftd
yvrpnlalaegeldinvfqhkpylddfkkehnlditevfqvptaplglypgklksleevk
dgstvsapndpsnfarvlvmldelgwiklkdginpltaskadiaenlknikiveleaaql
prsradvdfavvngnyaissgmkltealfqepsfayvnwsavktadkdsqwlkdvteayn
sdafkayahkrfegykspaawnegaaklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3gxaA (A:)
keivfgttvgdfgdmvkeqiqpelekkgytvklveftdyvrpnlalaegeldinvfqhkp
ylddfkkehnlditevfqvptaplglypgklksleevkdgstvsapndpsnfarvlvmld
elgwiklkdginpltaskadiaenlknikiveleaaqlprsradvdfavvngnyaissgm
kltealfqepsfayvnwsavktadkdsqwlkdvteaynsdafkayahkrfegykspaaw

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3gxaB (B:)
mgqkdsapaasasaaadngaakkeivfgttvgdfgdmvkeqiqpelekkgytvklveftd
yvrpnlalaegeldinvfqhkpylddfkkehnlditevfqvptaplglypgklksleevk
dgstvsapndpsnfarvlvmldelgwiklkdginpltaskadiaenlknikiveleaaql
prsradvdfavvngnyaissgmkltealfqepsfayvnwsavktadkdsqwlkdvteayn
sdafkayahkrfegykspaawnegaaklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3gxaB (B:)
keivfgttvgdfgdmvkeqiqpelekkgytvklveftdyvrpnlalaegeldinvfqhkp
ylddfkkehnlditevfqvptaplglypgklksleevkdgstvsapndpsnfarvlvmld
elgwiklkdginpltaskadiaenlknikiveleaaqlprsradvdfavvngnyaissgm
kltealfqepsfayvnwsavktadkdsqwlkdvteaynsdafkayahkrfegykspaaw

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3gxaC (C:)
mgqkdsapaasasaaadngaakkeivfgttvgdfgdmvkeqiqpelekkgytvklveftd
yvrpnlalaegeldinvfqhkpylddfkkehnlditevfqvptaplglypgklksleevk
dgstvsapndpsnfarvlvmldelgwiklkdginpltaskadiaenlknikiveleaaql
prsradvdfavvngnyaissgmkltealfqepsfayvnwsavktadkdsqwlkdvteayn
sdafkayahkrfegykspaawnegaaklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3gxaC (C:)
keivfgttvgdfgdmvkeqiqpelekkgytvklveftdyvrpnlalaegeldinvfqhkp
ylddfkkehnlditevfqvptaplglypgklksleevkdgstvsapndpsnfarvlvmld
elgwiklkdginpltaskadiaenlknikiveleaaqlprsradvdfavvngnyaissgm
kltealfqepsfayvnwsavktadkdsqwlkdvteaynsdafkayahkrfegykspaawn
egaa

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3gxaD (D:)
mgqkdsapaasasaaadngaakkeivfgttvgdfgdmvkeqiqpelekkgytvklveftd
yvrpnlalaegeldinvfqhkpylddfkkehnlditevfqvptaplglypgklksleevk
dgstvsapndpsnfarvlvmldelgwiklkdginpltaskadiaenlknikiveleaaql
prsradvdfavvngnyaissgmkltealfqepsfayvnwsavktadkdsqwlkdvteayn
sdafkayahkrfegykspaawnegaaklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3gxaD (D:)
keivfgttvgdfgdmvkeqiqpelekkgytvklveftdyvrpnlalaegeldinvfqhkp
ylddfkkehnlditevfqvptaplglypgklksleevkdgstvsapndpsnfarvlvmld
elgwiklkdginpltaskadiaenlknikiveleaaqlprsradvdfavvngnyaissgm
kltealfqepsfayvnwsavktadkdsqwlkdvteaynsdafkayahkrfegykspaaw

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3gxaE (E:)
mgqkdsapaasasaaadngaakkeivfgttvgdfgdmvkeqiqpelekkgytvklveftd
yvrpnlalaegeldinvfqhkpylddfkkehnlditevfqvptaplglypgklksleevk
dgstvsapndpsnfarvlvmldelgwiklkdginpltaskadiaenlknikiveleaaql
prsradvdfavvngnyaissgmkltealfqepsfayvnwsavktadkdsqwlkdvteayn
sdafkayahkrfegykspaawnegaaklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3gxaE (E:)
keivfgttvgdfgdmvkeqiqpelekkgytvklveftdyvrpnlalaegeldinvfqhkp
ylddfkkehnlditevfqvptaplglypgklksleevkdgstvsapndpsnfarvlvmld
elgwiklkdginpltaskadiaenlknikiveleaaqlprsradvdfavvngnyaissgm
kltealfqepsfayvnwsavktadkdsqwlkdvteaynsdafkayahkrfegykspaaw

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3gxaF (F:)
mgqkdsapaasasaaadngaakkeivfgttvgdfgdmvkeqiqpelekkgytvklveftd
yvrpnlalaegeldinvfqhkpylddfkkehnlditevfqvptaplglypgklksleevk
dgstvsapndpsnfarvlvmldelgwiklkdginpltaskadiaenlknikiveleaaql
prsradvdfavvngnyaissgmkltealfqepsfayvnwsavktadkdsqwlkdvteayn
sdafkayahkrfegykspaawnegaaklehhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3gxaF (F:)
keivfgttvgdfgdmvkeqiqpelekkgytvklveftdyvrpnlalaegeldinvfqhkp
ylddfkkehnlditevfqvptaplglypgklksleevkdgstvsapndpsnfarvlvmld
elgwiklkdginpltaskadiaenlknikiveleaaqlprsradvdfavvngnyaissgm
kltealfqepsfayvnwsavktadkdsqwlkdvteaynsdafkayahkrfegykspaawn
egaa