PDB entry 3gvp

View 3gvp on RCSB PDB site
Description: Human SAHH-like domain of human adenosylhomocysteinase 3
Deposited on 2009-03-31, released 2009-06-09
The last revision was dated 2009-06-09, with a file datestamp of 2009-06-05.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: 0.182
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Adenosylhomocysteinase 3
    Species: Homo sapiens [TaxId:9606]
    Gene: AHCYL2, KIAA0828
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q96HN2 (2-434)
      • expression tag (0-1)
  • Chain 'B':
    Compound: Adenosylhomocysteinase 3
    Species: Homo sapiens [TaxId:9606]
    Gene: AHCYL2, KIAA0828
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q96HN2 (2-End)
      • expression tag (0-1)
  • Chain 'C':
    Compound: Adenosylhomocysteinase 3
    Species: Homo sapiens [TaxId:9606]
    Gene: AHCYL2, KIAA0828
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: Adenosylhomocysteinase 3
    Species: Homo sapiens [TaxId:9606]
    Gene: AHCYL2, KIAA0828
    Database cross-references and differences (RAF-indexed):
  • Heterogens: NAD, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3gvpA (A:)
smkqqknskgssdfcvknikqaefgrreieiaeqempalmalrkraqgekplagakivgc
thitaqtavlmetlgalgaqcrwaacniystlnevaaalaesgfpvfawkgeseddfwwc
idrcvnvegwqpnmilddggdlthwiykkypnmfkkikgiveesvtgvhrlyqlskagkl
cvpamnvndsvtkqkfdnlyccresildglkrttdmmfggkqvvvcgygevgkgccaalk
amgsivyvteidpicalqacmdgfrlvklnevirqvdivitctgnknvvtrehldrmkns
civcnmghsnteidvaslrtpeltwervrsqvdhviwpdgkrivllaegrllnlscstvp
tfvlsitattqalalielynapegrykqdvyllpkkmdeyvaslhlptfdahlteltdeq
akylglnkngpfkpn

    Sequence, based on observed residues (ATOM records):
    >3gvpA (A:)
smkqqknskgssdfcvknikqaefgrreieiaeqempalmalrkraqgekplagakivgc
thitaqtavlmetlgalgaqcrwaacniystlnevaaalaesgfpvfawkgeseddfwwc
idrcvnvegwqpnmilddggdlthwiykkypnmfkkikgiveesvtgvhrlyqlagklcv
pamnvndsvtkqkfdnlyccresildglkrttdmmfggkqvvvcgygevgkgccaalkam
gsivyvteidpicalqacmdgfrlvklnevirqvdivitctgnknvvtrehldrmknsci
vcnmghsnteidvaslrtpeltwervrsqvdhviwpdgkrivllaegrllnlscstvptf
vlsitattqalalielynapegrykqdvyllpkkmdeyvaslhlptfdahlteltdeqak
ylglnkngpfkpn

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3gvpB (B:)
smkqqknskgssdfcvknikqaefgrreieiaeqempalmalrkraqgekplagakivgc
thitaqtavlmetlgalgaqcrwaacniystlnevaaalaesgfpvfawkgeseddfwwc
idrcvnvegwqpnmilddggdlthwiykkypnmfkkikgiveesvtgvhrlyqlskagkl
cvpamnvndsvtkqkfdnlyccresildglkrttdmmfggkqvvvcgygevgkgccaalk
amgsivyvteidpicalqacmdgfrlvklnevirqvdivitctgnknvvtrehldrmkns
civcnmghsnteidvaslrtpeltwervrsqvdhviwpdgkrivllaegrllnlscstvp
tfvlsitattqalalielynapegrykqdvyllpkkmdeyvaslhlptfdahlteltdeq
akylglnkngpfkpn

    Sequence, based on observed residues (ATOM records):
    >3gvpB (B:)
smkqqknskgssdfcvknikqaefgrreieiaeqempalmalrkraqgekplagakivgc
thitaqtavlmetlgalgaqcrwaacniystlnevaaalaesgfpvfawkgeseddfwwc
idrcvnvegwqpnmilddggdlthwiykkypnmfkkikgiveesvtgvhrlyqlagklcv
pamnvndsvtkqkfdnlyccresildglkrttdmmfggkqvvvcgygevgkgccaalkam
gsivyvteidpicalqacmdgfrlvklnevirqvdivitctgnknvvtrehldrmknsci
vcnmghsnteidvaslrtpeltwervrsqvdhviwpdgkrivllaegrllnlscstvptf
vlsitattqalalielynapegrykqdvyllpkkmdeyvaslhlptfdahlteltdeqak
ylglnkngpfkp

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3gvpC (C:)
smkqqknskgssdfcvknikqaefgrreieiaeqempalmalrkraqgekplagakivgc
thitaqtavlmetlgalgaqcrwaacniystlnevaaalaesgfpvfawkgeseddfwwc
idrcvnvegwqpnmilddggdlthwiykkypnmfkkikgiveesvtgvhrlyqlskagkl
cvpamnvndsvtkqkfdnlyccresildglkrttdmmfggkqvvvcgygevgkgccaalk
amgsivyvteidpicalqacmdgfrlvklnevirqvdivitctgnknvvtrehldrmkns
civcnmghsnteidvaslrtpeltwervrsqvdhviwpdgkrivllaegrllnlscstvp
tfvlsitattqalalielynapegrykqdvyllpkkmdeyvaslhlptfdahlteltdeq
akylglnkngpfkpn

    Sequence, based on observed residues (ATOM records):
    >3gvpC (C:)
qqknskgssdfcvknikqaefgrreieiaeqempalmalrkraqgekplagakivgcthi
taqtavlmetlgalgaqcrwaacniystlnevaaalaesgfpvfawkgeseddfwwcidr
cvnvegwqpnmilddggdlthwiykkypnmfkkikgiveesvtgvhrlyqlskagklcvp
amnvndsvtkqkfdnlyccresildglkrttdmmfggkqvvvcgygevgkgccaalkamg
sivyvteidpicalqacmdgfrlvklnevirqvdivitctgnknvvtrehldrmknsciv
cnmghsnteidvaslrtpeltwervrsqvdhviwpdgkrivllaegrllnlscstvptfv
lsitattqalalielynapegrykqdvyllpkkmdeyvaslhlptfdahlteltdeqaky
lglnkngpfkpn

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3gvpD (D:)
smkqqknskgssdfcvknikqaefgrreieiaeqempalmalrkraqgekplagakivgc
thitaqtavlmetlgalgaqcrwaacniystlnevaaalaesgfpvfawkgeseddfwwc
idrcvnvegwqpnmilddggdlthwiykkypnmfkkikgiveesvtgvhrlyqlskagkl
cvpamnvndsvtkqkfdnlyccresildglkrttdmmfggkqvvvcgygevgkgccaalk
amgsivyvteidpicalqacmdgfrlvklnevirqvdivitctgnknvvtrehldrmkns
civcnmghsnteidvaslrtpeltwervrsqvdhviwpdgkrivllaegrllnlscstvp
tfvlsitattqalalielynapegrykqdvyllpkkmdeyvaslhlptfdahlteltdeq
akylglnkngpfkpn

    Sequence, based on observed residues (ATOM records):
    >3gvpD (D:)
qknskgssdfcvknikqaefgrreieiaeqempalmalrkraqgekplagakivgcthit
aqtavlmetlgalgaqcrwaacniystlnevaaalaesgfpvfawkgeseddfwwcidrc
vnvegwqpnmilddggdlthwiykkypnmfkkikgiveesvtgvhrlyqlskagklcvpa
mnvndsvtkqkfdnlyccresildglkrttdmmfggkqvvvcgygevgkgccaalkamgs
ivyvteidpicalqacmdgfrlvklnevirqvdivitctgnknvvtrehldrmknscivc
nmghsnteidvaslrtpeltwervrsqvdhviwpdgkrivllaegrllnlscstvptfvl
sitattqalalielynapegrykqdvyllpkkmdeyvaslhlptfdahlteltdeqakyl
glnkngpfkpn