PDB entry 3gvm

View 3gvm on RCSB PDB site
Description: Structure of the homodimeric WXG-100 family protein from Streptococcus agalactiae
Class: viral protein
Keywords: WXG motif, Four-helical bundle, VIRAL PROTEIN
Deposited on 2009-03-31, released 2010-09-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: N/A
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative uncharacterized protein SAG1039
    Species: Streptococcus agalactiae serogroup V [TaxId:208435]
    Gene: SAG1039
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DZR0 (4-End)
      • expression tag (0-3)
    Domains in SCOPe 2.08: d3gvma1, d3gvma2
  • Chain 'B':
    Compound: Putative uncharacterized protein SAG1039
    Species: Streptococcus agalactiae serogroup V [TaxId:208435]
    Gene: SAG1039
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3gvmb_
  • Chain 'C':
    Compound: Putative uncharacterized protein SAG1039
    Species: Streptococcus agalactiae serogroup V [TaxId:208435]
    Gene: SAG1039
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8DZR0 (4-End)
      • expression tag (0-3)
    Domains in SCOPe 2.08: d3gvmc1, d3gvmc2
  • Chain 'D':
    Compound: Putative uncharacterized protein SAG1039
    Species: Streptococcus agalactiae serogroup V [TaxId:208435]
    Gene: SAG1039
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3gvmd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3gvmA (A:)
gamsqikltpeelrssaqkytagsqqvtevlnlltqeqavidenwdgstfdsfeaqfnel
spkitefaqlledinqqllkvadiieqtdadiasqisg

    Sequence, based on observed residues (ATOM records): (download) 
    >3gvmA (A:)
gamsqikltpeelrssaqkytagsqqvtevlnlltqeqavidenwdgstfdsfeaqfnel
spkitefaqlledinqqllkvadiieqtdadiasqi

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3gvmB (B:)
gamsqikltpeelrssaqkytagsqqvtevlnlltqeqavidenwdgstfdsfeaqfnel
spkitefaqlledinqqllkvadiieqtdadiasqisg

    Sequence, based on observed residues (ATOM records): (download) 
    >3gvmB (B:)
qikltpeelrssaqkytagsqqvtevlnlltqeqavidenwdgstfdsfeaqfnelspki
tefaqlledinqqllkvadiieqtdadiasqisg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3gvmC (C:)
gamsqikltpeelrssaqkytagsqqvtevlnlltqeqavidenwdgstfdsfeaqfnel
spkitefaqlledinqqllkvadiieqtdadiasqisg

    Sequence, based on observed residues (ATOM records): (download) 
    >3gvmC (C:)
gamsqikltpeelrssaqkytagsqqvtevlnlltqeqavidenwdgstfdsfeaqfnel
spkitefaqlledinqqllkvadiieqtdadiasqis

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3gvmD (D:)
gamsqikltpeelrssaqkytagsqqvtevlnlltqeqavidenwdgstfdsfeaqfnel
spkitefaqlledinqqllkvadiieqtdadiasqisg

    Sequence, based on observed residues (ATOM records): (download) 
    >3gvmD (D:)
qikltpeelrssaqkytagsqqvtevlnlltqeqavidenwdgstfdsfeaqfnelspki
tefaqlledinqqllkvadiieqtdadiasqisg