PDB entry 3gv2

View 3gv2 on RCSB PDB site
Description: x-ray structure of hexameric hiv-1 ca
Deposited on 2009-03-30, released 2009-06-23
The last revision was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 7 Å
R-factor: N/A
AEROSPACI score: -0.11 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Capsid protein p24,Carbon dioxide-concentrating mechanism protein CcmK homolog 4
    Species: Synechocystis sp. (strain PCC 6803 / Kazusa) [TaxId:1111708]
    Gene: ccmK4, slr1839
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12493 (0-218)
      • engineered mutation (183-184)
    • Uniprot P73407
  • Chain 'B':
    Compound: Capsid protein p24,Carbon dioxide-concentrating mechanism protein CcmK homolog 4
    Species: Synechocystis sp. (strain PCC 6803 / Kazusa) [TaxId:1111708]
    Gene: ccmK4, slr1839
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12493 (0-218)
      • engineered mutation (183-184)
    • Uniprot P73407
  • Chain 'C':
    Compound: Capsid protein p24,Carbon dioxide-concentrating mechanism protein CcmK homolog 4
    Species: Synechocystis sp. (strain PCC 6803 / Kazusa) [TaxId:1111708]
    Gene: ccmK4, slr1839
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12493 (0-218)
      • engineered mutation (183-184)
    • Uniprot P73407
  • Chain 'D':
    Compound: Capsid protein p24,Carbon dioxide-concentrating mechanism protein CcmK homolog 4
    Species: Synechocystis sp. (strain PCC 6803 / Kazusa) [TaxId:1111708]
    Gene: ccmK4, slr1839
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12493 (0-218)
      • engineered mutation (183-184)
    • Uniprot P73407
  • Chain 'E':
    Compound: Capsid protein p24,Carbon dioxide-concentrating mechanism protein CcmK homolog 4
    Species: Synechocystis sp. (strain PCC 6803 / Kazusa) [TaxId:1111708]
    Gene: ccmK4, slr1839
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12493 (0-218)
      • engineered mutation (183-184)
    • Uniprot P73407
  • Chain 'F':
    Compound: Capsid protein p24,Carbon dioxide-concentrating mechanism protein CcmK homolog 4
    Species: Synechocystis sp. (strain PCC 6803 / Kazusa) [TaxId:1111708]
    Gene: ccmK4, slr1839
    Database cross-references and differences (RAF-indexed):
    • Uniprot P12493 (0-218)
      • engineered mutation (183-184)
    • Uniprot P73407

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3gv2A (A:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacqgvggtrpelmsaqsavgsiet
igfpgilaaadamvkagritivgyiragsarftlnirgdvqevktamaagidainrtega
dvktwviiprphenvvavlpidfspevepfryaaeglevlfq

    Sequence, based on observed residues (ATOM records):
    >3gv2A (A:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacq

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3gv2B (B:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacqgvggtrpelmsaqsavgsiet
igfpgilaaadamvkagritivgyiragsarftlnirgdvqevktamaagidainrtega
dvktwviiprphenvvavlpidfspevepfryaaeglevlfq

    Sequence, based on observed residues (ATOM records):
    >3gv2B (B:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacq

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3gv2C (C:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacqgvggtrpelmsaqsavgsiet
igfpgilaaadamvkagritivgyiragsarftlnirgdvqevktamaagidainrtega
dvktwviiprphenvvavlpidfspevepfryaaeglevlfq

    Sequence, based on observed residues (ATOM records):
    >3gv2C (C:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacq

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3gv2D (D:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacqgvggtrpelmsaqsavgsiet
igfpgilaaadamvkagritivgyiragsarftlnirgdvqevktamaagidainrtega
dvktwviiprphenvvavlpidfspevepfryaaeglevlfq

    Sequence, based on observed residues (ATOM records):
    >3gv2D (D:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacq

  • Chain 'E':
    Sequence, based on SEQRES records:
    >3gv2E (E:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacqgvggtrpelmsaqsavgsiet
igfpgilaaadamvkagritivgyiragsarftlnirgdvqevktamaagidainrtega
dvktwviiprphenvvavlpidfspevepfryaaeglevlfq

    Sequence, based on observed residues (ATOM records):
    >3gv2E (E:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacq

  • Chain 'F':
    Sequence, based on SEQRES records:
    >3gv2F (F:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacqgvggtrpelmsaqsavgsiet
igfpgilaaadamvkagritivgyiragsarftlnirgdvqevktamaagidainrtega
dvktwviiprphenvvavlpidfspevepfryaaeglevlfq

    Sequence, based on observed residues (ATOM records):
    >3gv2F (F:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvhagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmysptsildirqgpkepfrdyvdrfyktlraeqasqe
vknaatetllvqnanpdcktilkalgpgatleemmtacq