PDB entry 3grv

View 3grv on RCSB PDB site
Description: Crystal Structure of the Complex between Adenosine and Methanocaldococcus jannaschi Dim1
Class: transferase
Keywords: DimethylAdenosine Transferase, Rossmann fold, Ribosomal Assembly S-Adenosyl-L-Methionine, RRNA, Methyltransferase, RNA-binding, rRNA processing, S-adenosyl-L-methionine, Transferase
Deposited on 2009-03-26, released 2010-03-31
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-11-12, with a file datestamp of 2014-11-07.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.183
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Dimethyladenosine transferase
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: ksgA, MJ1029
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q58435
      • engineered (156-157)
    Domains in SCOPe 2.08: d3grva_
  • Heterogens: ADN, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3grvA (A:)
    mgsshhhhhhssglvprgshmfkpkkklgqcflidknfvnkavesanltkddvvleiglg
    kgilteelaknakkvyvieidkslepyanklkelynnieiiwgdalkvdlnkldfnkvva
    nlpyqisspitfklikrgfdlavlmyqyefakrmvaaagtkdygrlsvavqsradveiva
    kvppsafypkpkvysaivkikpnkgkyhienenffddflraifqhrnksvrkalidsske
    lnynkdemkkiledflntnseiknlinekvfklsvkdivnlsnefyrflqnrgrl
    

    Sequence, based on observed residues (ATOM records): (download)
    >3grvA (A:)
    qcflidknfvnkavesanltkddvvleiglgkgilteelaknakkvyvieidkslepyan
    klkelynnieiiwgdalkvdlnkldfnkvvanlpyqisspitfklikrgfdlavlmyqye
    fakrmvaaagtkdygrlsvavqsradveivakvppsafypkpkvysaivkikpnkgkyhi
    enenffddflraifqhrnksvrkalidsskelnynkdemkkiledflntnseiknlinek
    vfklsvkdivnlsnefyrflqn