PDB entry 3gpx
View 3gpx on RCSB PDB site
Description: Sequence-matched MutM Interrogation Complex 4 (IC4)
Class: Lyase/DNA
Keywords: DNA glycosylase, DNA repair, damage search, base extrusion, disulfide crosslinking, DNA damage, DNA-binding, Glycosidase, Hydrolase, Lyase, Metal-binding, Multifunctional enzyme, Zinc-finger, Lyase-DNA COMPLEX
Deposited on
2009-03-23, released
2009-11-10
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-11-01, with a file datestamp of
2017-10-27.
Experiment type: XRAY
Resolution: 1.78 Å
R-factor: N/A
AEROSPACI score: 0.38
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA glycosylase
Species: Geobacillus stearothermophilus [TaxId:1422]
Gene: mutM
Database cross-references and differences (RAF-indexed):
- Uniprot P84131 (0-256)
- conflict (1)
- engineered (164)
Domains in SCOPe 2.08: d3gpxa1, d3gpxa2, d3gpxa3 - Chain 'B':
Compound: DNA (5'-d(*a*gp*gp*tp*ap*gp*ap*cp*tp*cp*gp*gp*ap*cp*gp*c)-3')
- Chain 'C':
Compound: DNA (5'-d(*tp*gp*cp*gp*tp*cp*cp*gp*ap*gp*tp*cp*tp*ap*cp*c)-3')
- Heterogens: ZN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3gpxA (A:)
pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkf
lkflldrdalishlrmegryavasaleplephthvvfcftdgselryrdvrkfgtmhvya
keeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdesl
fragilpgrpaaslsskeierlheemvatigeavmkggqhhlyvygrqgnpckrcgtpie
ktvvagrgthycprcqr
Sequence, based on observed residues (ATOM records): (download)
>3gpxA (A:)
pelpevetirrtllplivgktiedvrifwpniirhprdseafaarmigqtvrglerrgkf
lkflldrdalishlrmegryavasaleplephthvvfcftdgselryrdvrkfgtmhvya
keeadrrpplaelgpeplspafspavlaeravktkrsvkallldctvvagfgniyvdesl
fragilpgrpaaslsskeierlheemvatigeavmhlyvygrqgnpckrcgtpiektvva
grgthycprcqr
- Chain 'B':
No sequence available.
- Chain 'C':
No sequence available.