PDB entry 3gpo

View 3gpo on RCSB PDB site
Description: Crystal structure of macro domain of Chikungunya virus in complex with ADP-ribose
Deposited on 2009-03-23, released 2009-07-21
The last revision was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.171
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: non-structural protein 3
    Species: Chikungunya virus [TaxId:371094]
    Gene: NSP3
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8JUX6 (8-167)
      • expression tag (6-7)
  • Chain 'B':
    Compound: non-structural protein 3
    Species: Chikungunya virus [TaxId:371094]
    Gene: NSP3
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: non-structural protein 3
    Species: Chikungunya virus [TaxId:371094]
    Gene: NSP3
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: non-structural protein 3
    Species: Chikungunya virus [TaxId:371094]
    Gene: NSP3
    Database cross-references and differences (RAF-indexed):
  • Heterogens: APR, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3gpoA (A:)
mkhhhhhhapsyrvkrmdiakndeecvvnaanprglpgdgvckavykkwpesfknsatpv
gtaktvmcgtypvihavgpnfsnysesegdrelaaayrevakevtrlgvnsvaipllstg
vysggkdrltqslnhlftamdstdadvviycrdkewekkiseaiqmrt

    Sequence, based on observed residues (ATOM records):
    >3gpoA (A:)
hhapsyrvkrmdiakndeecvvnaanprglpgdgvckavykkwpesfknsatpvgtaktv
mcgtypvihavgpnfsnysesegdrelaaayrevakevtrlgvnsvaipllstgvysggk
drltqslnhlftamdstdadvviycrdkewekkiseaiqmrt

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3gpoB (B:)
mkhhhhhhapsyrvkrmdiakndeecvvnaanprglpgdgvckavykkwpesfknsatpv
gtaktvmcgtypvihavgpnfsnysesegdrelaaayrevakevtrlgvnsvaipllstg
vysggkdrltqslnhlftamdstdadvviycrdkewekkiseaiqmrt

    Sequence, based on observed residues (ATOM records):
    >3gpoB (B:)
apsyrvkrmdiakndeecvvnaanprglpgdgvckavykkwpesfknsatpvgtaktvmc
gtypvihavgpnfsnysesegdrelaaayrevakevtrlgvnsvaipllstgvysggkdr
ltqslnhlftamdstdadvviycrdkewekkiseaiqmrt

  • Chain 'C':
    Sequence, based on SEQRES records:
    >3gpoC (C:)
mkhhhhhhapsyrvkrmdiakndeecvvnaanprglpgdgvckavykkwpesfknsatpv
gtaktvmcgtypvihavgpnfsnysesegdrelaaayrevakevtrlgvnsvaipllstg
vysggkdrltqslnhlftamdstdadvviycrdkewekkiseaiqmrt

    Sequence, based on observed residues (ATOM records):
    >3gpoC (C:)
apsyrvkrmdiakndeecvvnaanprglpgdgvckavykkwpesfknsatpvgtaktvmc
gtypvihavgpnfsnysesegdrelaaayrevakevtrlgvnsvaipllstgvysggkdr
ltqslnhlftamdstdadvviycrdkewekkiseaiqmrt

  • Chain 'D':
    Sequence, based on SEQRES records:
    >3gpoD (D:)
mkhhhhhhapsyrvkrmdiakndeecvvnaanprglpgdgvckavykkwpesfknsatpv
gtaktvmcgtypvihavgpnfsnysesegdrelaaayrevakevtrlgvnsvaipllstg
vysggkdrltqslnhlftamdstdadvviycrdkewekkiseaiqmrt

    Sequence, based on observed residues (ATOM records):
    >3gpoD (D:)
psyrvkrmdiakndeecvvnaanprglpgdgvckavykkwpesfknsatpvgtaktvmcg
typvihavgpnfsnysesegdrelaaayrevakevtrlgvnsvaipllstgvysggkdrl
tqslnhlftamdstdadvviycrdkewekkiseaiqmr