PDB entry 3gox

View 3gox on RCSB PDB site
Description: crystal structure of the beta-beta-alpha-me type ii restriction endonuclease hpy99i in the absence of edta
Deposited on 2009-03-20, released 2009-04-28
The last revision was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Restriction endonuclease Hpy99I
    Species: Helicobacter pylori [TaxId:85963]
    Gene: jhp_0755, synthetic gene codon optimized for Escherichia coli
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Restriction endonuclease Hpy99I
    Species: Helicobacter pylori [TaxId:85963]
    Gene: jhp_0755, synthetic gene codon optimized for Escherichia coli
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: 5'-(*dcp*dtp*dcp*dgp*dap*dcp*dgp*dtp*dap*dgp*da)-3'
    Species: synthetic, synthetic
  • Chain 'D':
    Compound: 5'-(*dtp*dap*dcp*dgp*dtp*dcp*dgp*dap*dgp*dtp*dc)-3'
    Species: synthetic, synthetic
  • Heterogens: ZN, NA, 1PE, HOH

PDB Chain Sequences:
This PDB entry is not classified in SCOPe 2.08, so the chain sequences below are not included in the ASTRAL sequence sets.

  • Chain 'A':
    Sequence, based on SEQRES records:
    >3goxA (A:)
mghhhhhhefmlknddfviaknqlgnivpnsvgviravngksamvlfiglnelkrvdfse
leaidiyrtgkgydkkicnichilkntdgfeinqtdakgrkttrpscrecrknidgvkls
stekkkmdeiappkgsvftcpicekrsivgvtanlvhdhnhdtgwgrewicdscntglgr
fkdnpkflekvieylkkyek

    Sequence, based on observed residues (ATOM records):
    >3goxA (A:)
mlknddfviaknqlgnivpnsvgviravngksamvlfiglnelkrvdfseleaidiyrtg
kgydkkicnichilkntdgfeinqtdakgrkttrpscrecrknidgvklsstekkkmdei
appkgsvftcpicekrsivgvtanlvhdhnhdtgwgrewicdscntglgrfkdnpkflek
vieylkkye

  • Chain 'B':
    Sequence, based on SEQRES records:
    >3goxB (B:)
mghhhhhhefmlknddfviaknqlgnivpnsvgviravngksamvlfiglnelkrvdfse
leaidiyrtgkgydkkicnichilkntdgfeinqtdakgrkttrpscrecrknidgvkls
stekkkmdeiappkgsvftcpicekrsivgvtanlvhdhnhdtgwgrewicdscntglgr
fkdnpkflekvieylkkyek

    Sequence, based on observed residues (ATOM records):
    >3goxB (B:)
mlknddfviaknqlgnivpnsvgviravngksamvlfiglnelkrvdfseleaidiyrtg
kgydkkicnichilkntdgfeinqtdakgrkttrpscrecrknidgvklsstekkkmdei
appkgsvftcpicekrsivgvtanlvhdhnhdtgwgrewicdscntglgrfkdnpkflek
vieylkkye

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.